Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005212A_C01 KMC005212A_c01
(1054 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC17803.1| peroxiredoxin [Phaseolus vulgaris] gi|11558244|e... 439 e-122
emb|CAC48323.1| 2-Cys peroxiredoxin [Pisum sativum] 432 e-120
emb|CAC84143.2| thioredoxin peroxidase [Nicotiana tabacum] 407 e-112
dbj|BAB08951.1| 2-cys peroxiredoxin-like protein [Arabidopsis th... 397 e-109
ref|NP_568166.1| 2-cys peroxiredoxin-like protein; protein id: A... 397 e-109
>emb|CAC17803.1| peroxiredoxin [Phaseolus vulgaris] gi|11558244|emb|CAC17804.1|
peroxiredoxin [Phaseolus vulgaris]
Length = 260
Score = 439 bits (1128), Expect = e-122
Identities = 223/261 (85%), Positives = 237/261 (90%)
Frame = -2
Query: 1026 PSASLLSSNPKILFTSKSSSSSSAPLSFPNFSNSLCKPLRTSLHPSISFNRSSRSPRSFV 847
P ASL+SSNP ILF+ K SSS + LSFPN NSL KPLRTSL+PS S R+FV
Sbjct: 6 PCASLISSNPNILFSPKFPSSSFSSLSFPNSPNSLFKPLRTSLNPS------SPPLRTFV 59
Query: 846 VRASSELPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 667
RASSELPLVGN APDFEAEAVFDQEFIKVKLS+YIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 60 ARASSELPLVGNTAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITA 119
Query: 666 FSDRHAEFEEINTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPLVSDVTQSISKSYGV 487
FSDR+AEFE +NTEILGVSVDSVFSHLAWVQT+RKSGGLGDLNYPL+SDVT+SISKSY V
Sbjct: 120 FSDRYAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSYDV 179
Query: 486 LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 307
LIPDQGIALRGLFIIDKEGVIQHSTINNL IGRSVDETKRTLQALQYVQENPDEVCPAGW
Sbjct: 180 LIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGW 239
Query: 306 KPGEKSMKPDPKLSKDYFAAV 244
KPGEKSMKPDPKLSK+YF+A+
Sbjct: 240 KPGEKSMKPDPKLSKEYFSAI 260
>emb|CAC48323.1| 2-Cys peroxiredoxin [Pisum sativum]
Length = 263
Score = 432 bits (1111), Expect = e-120
Identities = 225/261 (86%), Positives = 235/261 (89%)
Frame = -2
Query: 1026 PSASLLSSNPKILFTSKSSSSSSAPLSFPNFSNSLCKPLRTSLHPSISFNRSSRSPRSFV 847
P ASLL SNP LF+ K SS + LS PN NSL K LRTSL +S NRSS S R+FV
Sbjct: 6 PFASLLYSNPNTLFSPKFSSPRLSSLSIPNAPNSLPK-LRTSL--PLSLNRSSSSRRTFV 62
Query: 846 VRASSELPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 667
VRAS ELPLVGN APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 63 VRASGELPLVGNSAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 122
Query: 666 FSDRHAEFEEINTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPLVSDVTQSISKSYGV 487
FSDRHAEF+ INTEILGVSVDSVFSHLAWVQ++RKSGGLGDL YPLVSDVT+SIS+SYGV
Sbjct: 123 FSDRHAEFDAINTEILGVSVDSVFSHLAWVQSDRKSGGLGDLKYPLVSDVTKSISESYGV 182
Query: 486 LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 307
LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW
Sbjct: 183 LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 242
Query: 306 KPGEKSMKPDPKLSKDYFAAV 244
KPGEKSMKPDPK SK+YFAAV
Sbjct: 243 KPGEKSMKPDPKGSKEYFAAV 263
>emb|CAC84143.2| thioredoxin peroxidase [Nicotiana tabacum]
Length = 271
Score = 407 bits (1047), Expect = e-112
Identities = 211/265 (79%), Positives = 228/265 (85%), Gaps = 5/265 (1%)
Frame = -2
Query: 1023 SASLLSSNPKILFTSKSSSSS---SAPLSFPNFSNSL--CKPLRTSLHPSISFNRSSRSP 859
S +LLSSNPK S SS S LS P+ N L CKP + + S+S +
Sbjct: 7 STALLSSNPKAASISPKSSFQAPISQCLSVPSSFNGLRNCKPFVSRVARSLSTRVAQSQR 66
Query: 858 RSFVVRASSELPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT 679
R FVVRASSELPLVGN+APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT
Sbjct: 67 RRFVVRASSELPLVGNQAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT 126
Query: 678 EITAFSDRHAEFEEINTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPLVSDVTQSISK 499
EITAFSDR+ EFE++NTEILGVSVDSVFSHLAWVQT+RKSGGLGDLNYPL+SDVT+SISK
Sbjct: 127 EITAFSDRYGEFEKLNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISK 186
Query: 498 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVC 319
SY VLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQYVQ+NPDEVC
Sbjct: 187 SYNVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLQALQYVQDNPDEVC 246
Query: 318 PAGWKPGEKSMKPDPKLSKDYFAAV 244
PAGWKPGEKSMKPDPK SK+YFA++
Sbjct: 247 PAGWKPGEKSMKPDPKGSKEYFASI 271
>dbj|BAB08951.1| 2-cys peroxiredoxin-like protein [Arabidopsis thaliana]
Length = 271
Score = 397 bits (1020), Expect = e-109
Identities = 209/275 (76%), Positives = 236/275 (85%), Gaps = 8/275 (2%)
Frame = -2
Query: 1044 LAWLFCPSASLLSSNPKILFTSKSSSSSSAPLSFPNF-------SNSLCKPLRTSLHPSI 886
+A + S++ L S+ ++L SKSS S +SFP S+SLC S S+
Sbjct: 1 MASIASSSSTTLLSSSRVLLPSKSSLLSPT-VSFPRIIPSSSASSSSLCSGF--SSLGSL 57
Query: 885 SFNRSSRSPRSFVVRASSE-LPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY 709
+ NRS+ S R+F V+A ++ LPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY
Sbjct: 58 TTNRSA-SRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY 116
Query: 708 PLDFTFVCPTEITAFSDRHAEFEEINTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPL 529
PLDFTFVCPTEITAFSDR+ EFE++NTE+LGVSVDSVFSHLAWVQT+RKSGGLGDLNYPL
Sbjct: 117 PLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPL 176
Query: 528 VSDVTQSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQ 349
VSD+T+SISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQ
Sbjct: 177 VSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQ 236
Query: 348 YVQENPDEVCPAGWKPGEKSMKPDPKLSKDYFAAV 244
YVQENPDEVCPAGWKPGEKSMKPDPKLSK+YF+A+
Sbjct: 237 YVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 271
>ref|NP_568166.1| 2-cys peroxiredoxin-like protein; protein id: At5g06290.1, supported
by cDNA: 15640., supported by cDNA: gi_11908047,
supported by cDNA: gi_12642865, supported by cDNA:
gi_13265489, supported by cDNA: gi_15451081, supported by
cDNA: gi_20148348 [Arabidopsis thaliana]
gi|11908048|gb|AAG41453.1|AF326871_1 putative 2-cys
peroxiredoxin protein [Arabidopsis thaliana]
gi|12642866|gb|AAK00375.1|AF339693_1 putative 2-cys
peroxiredoxin protein [Arabidopsis thaliana]
gi|15451082|gb|AAK96812.1| 2-cys peroxiredoxin-like
protein [Arabidopsis thaliana] gi|20148349|gb|AAM10065.1|
2-cys peroxiredoxin-like protein [Arabidopsis thaliana]
Length = 273
Score = 397 bits (1020), Expect = e-109
Identities = 209/275 (76%), Positives = 236/275 (85%), Gaps = 8/275 (2%)
Frame = -2
Query: 1044 LAWLFCPSASLLSSNPKILFTSKSSSSSSAPLSFPNF-------SNSLCKPLRTSLHPSI 886
+A + S++ L S+ ++L SKSS S +SFP S+SLC S S+
Sbjct: 3 MASIASSSSTTLLSSSRVLLPSKSSLLSPT-VSFPRIIPSSSASSSSLCSGF--SSLGSL 59
Query: 885 SFNRSSRSPRSFVVRASSE-LPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY 709
+ NRS+ S R+F V+A ++ LPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY
Sbjct: 60 TTNRSA-SRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY 118
Query: 708 PLDFTFVCPTEITAFSDRHAEFEEINTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPL 529
PLDFTFVCPTEITAFSDR+ EFE++NTE+LGVSVDSVFSHLAWVQT+RKSGGLGDLNYPL
Sbjct: 119 PLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPL 178
Query: 528 VSDVTQSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQ 349
VSD+T+SISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQ
Sbjct: 179 VSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQ 238
Query: 348 YVQENPDEVCPAGWKPGEKSMKPDPKLSKDYFAAV 244
YVQENPDEVCPAGWKPGEKSMKPDPKLSK+YF+A+
Sbjct: 239 YVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 273
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 928,609,509
Number of Sequences: 1393205
Number of extensions: 21916586
Number of successful extensions: 86407
Number of sequences better than 10.0: 725
Number of HSP's better than 10.0 without gapping: 71522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82449
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 62360592902
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
