Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005119A_C01 KMC005119A_c01
(615 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191746.1| putative protein; protein id: At3g61870.1, supp... 206 2e-52
gb|ZP_00112009.1| hypothetical protein [Nostoc punctiforme] 108 7e-23
ref|NP_486789.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 103 1e-21
ref|NP_682283.1| ORF_ID:tll1493~hypothetical protein [Thermosyne... 102 5e-21
ref|ZP_00114704.1| hypothetical protein [Synechococcus sp. WH 8102] 100 2e-20
>ref|NP_191746.1| putative protein; protein id: At3g61870.1, supported by cDNA:
gi_16648774, supported by cDNA: gi_20466132 [Arabidopsis
thaliana] gi|11357588|pir||T47979 hypothetical protein
F21F14.40 - Arabidopsis thaliana
gi|6899885|emb|CAB71894.1| putative protein [Arabidopsis
thaliana] gi|16648775|gb|AAL25578.1| AT3g61870/F21F14_40
[Arabidopsis thaliana] gi|20466133|gb|AAM19988.1|
AT3g61870/F21F14_40 [Arabidopsis thaliana]
Length = 272
Score = 206 bits (524), Expect = 2e-52
Identities = 97/114 (85%), Positives = 109/114 (95%)
Frame = -1
Query: 615 TEERKELIKGSYREKHFNAGSILLGFGVFEAVGGGLNTWLRTGKLFPGPHLFAGAGITVL 436
TEERKEL+KGSYR+KHF+AGS+LLGFGV EAV GG+NT+LRTGKLFPGPHL+AGAGITVL
Sbjct: 159 TEERKELVKGSYRDKHFDAGSVLLGFGVLEAVFGGVNTYLRTGKLFPGPHLYAGAGITVL 218
Query: 435 WALAAALVPPMQKGSETARNLHIALNTLNVLLFIWQIPTGLEIVLKVFEFTKWP 274
WA AAALVP MQKG++TAR+LHIALN +NVLLFIWQIPTGL+IVLKVFEFTKWP
Sbjct: 219 WAAAAALVPAMQKGNDTARSLHIALNAVNVLLFIWQIPTGLDIVLKVFEFTKWP 272
>gb|ZP_00112009.1| hypothetical protein [Nostoc punctiforme]
Length = 156
Score = 108 bits (269), Expect = 7e-23
Identities = 57/106 (53%), Positives = 71/106 (66%)
Frame = -1
Query: 612 EERKELIKGSYREKHFNAGSILLGFGVFEAVGGGLNTWLRTGKLFPGPHLFAGAGITVLW 433
EE+KELIKG Y +H+ GSILLG V A+GG T++ GKLF GPHL AG G+T L
Sbjct: 47 EEKKELIKGRYNVRHYQIGSILLGLMVASAIGGMGVTYINNGKLFVGPHLLAGLGMTGLI 106
Query: 432 ALAAALVPPMQKGSETARNLHIALNTLNVLLFIWQIPTGLEIVLKV 295
A +AAL P MQKG+ AR HI LN + LF WQ TG++IV ++
Sbjct: 107 AFSAALSPYMQKGANWARATHILLNFTLLGLFAWQAVTGVQIVQRI 152
>ref|NP_486789.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25343553|pir||AF2149
hypothetical protein alr2749 [imported] - Nostoc sp.
(strain PCC 7120) gi|17131842|dbj|BAB74448.1|
ORF_ID:alr2749~hypothetical protein [Nostoc sp. PCC
7120]
Length = 156
Score = 103 bits (258), Expect = 1e-21
Identities = 54/106 (50%), Positives = 71/106 (66%)
Frame = -1
Query: 612 EERKELIKGSYREKHFNAGSILLGFGVFEAVGGGLNTWLRTGKLFPGPHLFAGAGITVLW 433
E++KELIKG Y +H+ GSILL V A+GG T++ GKLF GPHL AG G+T L
Sbjct: 47 EQKKELIKGRYNVRHYQIGSILLALMVAGAIGGMAVTYINNGKLFVGPHLLAGLGMTGLI 106
Query: 432 ALAAALVPPMQKGSETARNLHIALNTLNVLLFIWQIPTGLEIVLKV 295
A +AAL P MQKG+ AR HI +N + + LF WQ TG++IV ++
Sbjct: 107 AFSAALSPYMQKGANWARVSHILINFVILGLFTWQAITGVQIVQRI 152
>ref|NP_682283.1| ORF_ID:tll1493~hypothetical protein [Thermosynechococcus elongatus
BP-1] gi|22295218|dbj|BAC09045.1|
ORF_ID:tll1493~hypothetical protein [Thermosynechococcus
elongatus BP-1]
Length = 155
Score = 102 bits (253), Expect = 5e-21
Identities = 52/106 (49%), Positives = 67/106 (63%)
Frame = -1
Query: 612 EERKELIKGSYREKHFNAGSILLGFGVFEAVGGGLNTWLRTGKLFPGPHLFAGAGITVLW 433
EE+K LI+ KH G+ILL V +GG T++ GKLF GPHL G +T L
Sbjct: 46 EEKKALIQAKVNVKHHQVGAILLALMVMGTIGGMAVTYINNGKLFVGPHLIVGLAMTALV 105
Query: 432 ALAAALVPPMQKGSETARNLHIALNTLNVLLFIWQIPTGLEIVLKV 295
A++A+L P MQKGSE AR LH+ LN V+LF WQ TGL+IV ++
Sbjct: 106 AISASLTPFMQKGSEAARALHMTLNLFLVILFGWQAVTGLQIVQRI 151
>ref|ZP_00114704.1| hypothetical protein [Synechococcus sp. WH 8102]
Length = 152
Score = 100 bits (248), Expect = 2e-20
Identities = 50/107 (46%), Positives = 70/107 (64%)
Frame = -1
Query: 612 EERKELIKGSYREKHFNAGSILLGFGVFEAVGGGLNTWLRTGKLFPGPHLFAGAGITVLW 433
E+RKEL+KG + ++H+ GSILL +GG T+L GKLF GPHL G +T +
Sbjct: 43 EQRKELVKGKFAQRHYLWGSILLAVMTVGTLGGMAVTYLNNGKLFVGPHLLVGLAMTGMI 102
Query: 432 ALAAALVPPMQKGSETARNLHIALNTLNVLLFIWQIPTGLEIVLKVF 292
ALAA+L P MQ+G+ AR H+ LN + LF+WQ +G+EIV K++
Sbjct: 103 ALAASLSPLMQRGNMIARKAHVGLNMGTLTLFLWQAFSGMEIVNKIW 149
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 537,775,992
Number of Sequences: 1393205
Number of extensions: 12235768
Number of successful extensions: 30872
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 29037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30748
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
