KMC005113A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC005113A_C02 KMC005113A_c02
AATAAAATAAAAACATTAAATTTAGCATTATTTAATATGTATGCAACAACCTTAAAGTAA
CACTTACCTAAGAATAAAGAGAGTATACACAAGAGAGAGACGGATACAACCACAAGGCAA
TGCAAAAAAAAAAAACCACAAGTCAATGAAATTTTTTTTGGGTTACAACAAGTCAATGAA
ATTAAATGAAAAAGGAAAAACCAGGAAATTAAACAAGTTGCCCCTGACTTGAATGAATGA
TGATTGATGACACTCATACATAGCAAACATAAAAACAATTAATATATGCGAATATGATTA
TTTATTAATGCACCCTCATCATGGGCTTGAAATTAAGTCCACCAAAGTCTTGAAATCCTG
TACGGCACTTCCTTTGGGTCCAGCAGCATCTTGTATAATCTGGTTCATCTGGGAGCAATT
TTCTCTAAACTTTTTCCCCTCTTCCTTGACCAGAATGAGATTCAAGCTGTTAAGCAAGGC
AGTTTGGGTGAACTCCCTACCCTCTATTATGATACCAATCCCCCACACATCTTGTCCCAA
TCTGGCATTCATACCTTGATCAGCAAAGTAAGGCCTGAAGATCATAGGCACCCCATTTGA
CATCCCTTCCATGGTAGAGTTGCACCCACCTTGACTCACAAACGCTCCTACGCTACCATG
GCTCAGGATTCTCGCTTGAGGCACCCATGGTAGCACTTTGCC


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005113A_C02 KMC005113A_c02
         (702 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA36972.1| flavonoid 3-O-galactosyl transferase [Vigna mungo]    147  1e-34
dbj|BAB41018.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [V...   134  2e-30
dbj|BAB41017.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [V...   134  2e-30
gb|AAD26203.1|AF117267_1 UDP glucose:flavonoid 3-O-glucosyl tran...   133  3e-30
dbj|BAB41019.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [V...   132  4e-30

>dbj|BAA36972.1| flavonoid 3-O-galactosyl transferase [Vigna mungo]
          Length = 455

 Score =  147 bits (371), Expect = 1e-34
 Identities = 68/125 (54%), Positives = 89/125 (70%)
 Frame = -1

Query: 702 GKVLPWVPQARILSHGSVGAFVSQGGCNSTMEGMSNGVPMIFRPYFADQGMNARLGQDVW 523
           GKV+ W PQ ++L HGSVG FV+  GCNS  E MSNGVPMI RP+F D G+  R+ +DVW
Sbjct: 329 GKVVGWAPQTQVLGHGSVGVFVTHCGCNSVFESMSNGVPMICRPFFGDHGLTGRMVEDVW 388

Query: 522 GIGIIIEGREFTQTALLNSLNLILVKEEGKKFRENCSQMNQIIQDAAGPKGSAVQDFKTL 343
            IG+ +EG  FT+  LL SL LILV+EEG   ++N  ++ + + DAAG +G A QDF TL
Sbjct: 389 EIGVRVEGGVFTKDGLLKSLRLILVEEEGNLMKKNAVKVKKTVLDAAGAQGKAAQDFNTL 448

Query: 342 VDLIS 328
           V+L+S
Sbjct: 449 VELVS 453

>dbj|BAB41018.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis labrusca x
           Vitis vinifera]
          Length = 456

 Score =  134 bits (336), Expect = 2e-30
 Identities = 63/127 (49%), Positives = 89/127 (69%)
 Frame = -1

Query: 702 GKVLPWVPQARILSHGSVGAFVSQGGCNSTMEGMSNGVPMIFRPYFADQGMNARLGQDVW 523
           G V+PW PQA +L+H +VGAFV+  G NS  E ++ GVP+I RP+F DQ +N R+ +DV 
Sbjct: 327 GMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL 386

Query: 522 GIGIIIEGREFTQTALLNSLNLILVKEEGKKFRENCSQMNQIIQDAAGPKGSAVQDFKTL 343
            IG+ IEG  FT++ L++  + IL +E+GKK REN   + +    AAGPKGS+ ++FKTL
Sbjct: 387 EIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAAGPKGSSTENFKTL 446

Query: 342 VDLISSP 322
           VD +S P
Sbjct: 447 VDFVSKP 453

>dbj|BAB41017.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis labrusca x
           Vitis vinifera]
          Length = 456

 Score =  134 bits (336), Expect = 2e-30
 Identities = 63/127 (49%), Positives = 89/127 (69%)
 Frame = -1

Query: 702 GKVLPWVPQARILSHGSVGAFVSQGGCNSTMEGMSNGVPMIFRPYFADQGMNARLGQDVW 523
           G V+PW PQA +L+H +VGAFV+  G NS  E ++ GVP+I RP+F DQ +N R+ +DV 
Sbjct: 327 GMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL 386

Query: 522 GIGIIIEGREFTQTALLNSLNLILVKEEGKKFRENCSQMNQIIQDAAGPKGSAVQDFKTL 343
            IG+ IEG  FT++ L++  + IL +E+GKK REN   + +    A GPKGS+ ++FKTL
Sbjct: 387 EIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFKTL 446

Query: 342 VDLISSP 322
           VDL+S P
Sbjct: 447 VDLVSKP 453

>gb|AAD26203.1|AF117267_1 UDP glucose:flavonoid 3-O-glucosyl transferase [Malus x domestica]
          Length = 483

 Score =  133 bits (334), Expect = 3e-30
 Identities = 61/125 (48%), Positives = 91/125 (72%)
 Frame = -1

Query: 702 GKVLPWVPQARILSHGSVGAFVSQGGCNSTMEGMSNGVPMIFRPYFADQGMNARLGQDVW 523
           G V+PW PQ  +L+H SVGAFVS  G NS ME ++  VPMI RPYFADQ +NAR+ ++V+
Sbjct: 353 GMVVPWAPQPHVLAHDSVGAFVSHCGWNSIMETIAGRVPMICRPYFADQRLNARMVEEVF 412

Query: 522 GIGIIIEGREFTQTALLNSLNLILVKEEGKKFRENCSQMNQIIQDAAGPKGSAVQDFKTL 343
            IG+ +E   FT+  L+ SL ++L  E G+KFR+N  ++ Q+  +A GP+GS+ ++FK+L
Sbjct: 413 EIGVTVEDGVFTREGLVKSLEVVLSPESGRKFRDNIKRVKQLAVEAVGPQGSSTRNFKSL 472

Query: 342 VDLIS 328
           +D++S
Sbjct: 473 LDIVS 477

>dbj|BAB41019.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera]
           gi|13620863|dbj|BAB41021.1| UDP-glucose:flavonoid
           3-O-glucosyltransferase [Vitis vinifera]
           gi|13620867|dbj|BAB41023.1| UDP-glucose:flavonoid
           3-O-glucosyltransferase [Vitis vinifera]
           gi|13620871|dbj|BAB41025.1| UDP-glucose:flavonoid
           3-O-glucosyltransferase [Vitis vinifera]
          Length = 456

 Score =  132 bits (333), Expect = 4e-30
 Identities = 62/127 (48%), Positives = 88/127 (68%)
 Frame = -1

Query: 702 GKVLPWVPQARILSHGSVGAFVSQGGCNSTMEGMSNGVPMIFRPYFADQGMNARLGQDVW 523
           G V+PW PQA +L+H +VGAFV+  G NS  E ++ GVP+I RP+F DQ +N R+ +D  
Sbjct: 327 GMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDAL 386

Query: 522 GIGIIIEGREFTQTALLNSLNLILVKEEGKKFRENCSQMNQIIQDAAGPKGSAVQDFKTL 343
            IG+ IEG  FT++ L++  + IL +E+GKK REN   + +    A GPKGS+ ++FKTL
Sbjct: 387 EIGVRIEGGVFTESGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFKTL 446

Query: 342 VDLISSP 322
           VDL+S P
Sbjct: 447 VDLVSKP 453

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 615,785,248
Number of Sequences: 1393205
Number of extensions: 13709606
Number of successful extensions: 35507
Number of sequences better than 10.0: 766
Number of HSP's better than 10.0 without gapping: 34288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35452
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 32250355128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPDL040e12_f BP054526 1 560
2 MPD015b01_f AV770997 1 540
3 MPD042d07_f AV772856 2 478
4 MFBL023f11_f BP042423 40 547
5 MPDL014g02_f AV777240 121 453
6 MFB095h08_f BP040959 121 585
7 SPDL071h01_f BP056417 121 609
8 MFB050c02_f BP037605 127 512
9 MFB074g07_f BP039413 164 707
10 MFB071b10_f BP039149 171 716
11 MFB014c02_f BP034934 229 568




Lotus japonicus
Kazusa DNA Research Institute