Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005111A_C01 KMC005111A_c01
(605 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200657.1| cinnamoyl-CoA reductase - like protein; protein... 261 6e-69
dbj|BAB68104.1| putative cinnamoyl CoA reductase [Oryza sativa (... 209 2e-53
gb|AAO60009.1| putative cinnamoyl-CoA reductase [Oryza sativa (j... 206 2e-52
ref|NP_178345.1| putative cinnamoyl-CoA reductase; protein id: A... 187 1e-46
gb|AAN71762.1| cinnamoyl CoA reductase 2 [Solanum tuberosum] 181 7e-45
>ref|NP_200657.1| cinnamoyl-CoA reductase - like protein; protein id: At5g58490.1,
supported by cDNA: 30064., supported by cDNA:
gi_17979314 [Arabidopsis thaliana]
gi|10177026|dbj|BAB10264.1| dihydroflavonol
4-reductase-like [Arabidopsis thaliana]
gi|21592589|gb|AAM64538.1| cinnamoyl-CoA reductase-like
protein [Arabidopsis thaliana]
gi|27754235|gb|AAO22571.1| putative cinnamoyl-CoA
reductase [Arabidopsis thaliana]
Length = 324
Score = 261 bits (666), Expect = 6e-69
Identities = 120/181 (66%), Positives = 150/181 (82%)
Frame = +3
Query: 63 KVLCVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDEKETKHLEAMEGAKGRLRLFEMDL 242
+V+CVTGASG IGSW+V LL RGY+VHATV++L+DEKETKHLE +EGA RL LFEMDL
Sbjct: 7 EVVCVTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKHLEGLEGAATRLHLFEMDL 66
Query: 243 LDTNSIATTVKGCNGVIHLACPNVIGEVTDPEKQILEPAIKGTVNVLKAAKEAGAERVVA 422
L ++++ + GC+GV HLA P ++ EV DP+KQ+L+PA+KGT+NVL AAKEA +RVV
Sbjct: 67 LQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEASVKRVVV 126
Query: 423 TSSISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYPIAKTLAEKAGWEFATETGFDVV 602
TSSISAITPSPNWPADKIK E+CW +YC++ GL+YP++KTLAEKA WEFA E G DVV
Sbjct: 127 TSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKGLDVV 186
Query: 603 M 605
+
Sbjct: 187 V 187
>dbj|BAB68104.1| putative cinnamoyl CoA reductase [Oryza sativa (japonica
cultivar-group)]
Length = 326
Score = 209 bits (533), Expect = 2e-53
Identities = 98/179 (54%), Positives = 133/179 (73%)
Frame = +3
Query: 66 VLCVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDEKETKHLEAMEGAKGRLRLFEMDLL 245
++CVTG SG IGSW+V+LLLDRGYTVHATV++L+D+ ET+HL+A++GA RLRLF+MDLL
Sbjct: 11 LVCVTGGSGFIGSWLVRLLLDRGYTVHATVKNLQDDGETRHLQALDGADTRLRLFQMDLL 70
Query: 246 DTNSIATTVKGCNGVIHLACPNVIGEVTDPEKQILEPAIKGTVNVLKAAKEAGAERVVAT 425
D SI V G +GV HLA P + DPE ++L+PA+ GT+NVL+AAK+ G RV+
Sbjct: 71 DPASITPAVDGAHGVFHLASPLTLHPTQDPEGELLKPAVSGTLNVLRAAKDCGVARVMLM 130
Query: 426 SSISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYPIAKTLAEKAGWEFATETGFDVV 602
+S AI P+P WPADK+ +D W D+E K+ +Y ++KTLAEKA W+FA + G +V
Sbjct: 131 ASQVAIVPNPEWPADKVIDDDSWADVELLKKHQHWYNVSKTLAEKAAWDFAAKEGLQLV 189
>gb|AAO60009.1| putative cinnamoyl-CoA reductase [Oryza sativa (japonica
cultivar-group)] gi|29124112|gb|AAO65853.1| putative
cinnamoyl-CoA reductase [Oryza sativa (japonica
cultivar-group)]
Length = 334
Score = 206 bits (523), Expect = 2e-52
Identities = 101/186 (54%), Positives = 135/186 (72%), Gaps = 5/186 (2%)
Frame = +3
Query: 63 KVLCVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDEKETKHLEAMEGAKG----RLRLF 230
+ + VTGASG IGS +V+ LL RGY+VHA V + D+ ET HL A+ A G RLR+F
Sbjct: 12 ETVLVTGASGFIGSCLVRRLLARGYSVHAAVLNPDDKAETDHLHALAAAGGGEGRRLRVF 71
Query: 231 EMDLLDTNSIATTVKGCNGVIHLACPNVIGEVTDPEKQILEPAIKGTVNVLKAAKEAGA- 407
DLLD ++ +GC+GV HLA P ++ V DP+ Q++ PA++GT+NVL+AAK+AG
Sbjct: 72 PGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQAQLMVPAVEGTLNVLRAAKDAGGV 131
Query: 408 ERVVATSSISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYPIAKTLAEKAGWEFATET 587
RVV TSSISAI PSP WPA +++ E CWTDL+YC++ G++YP +KTLAEKA W+FA E
Sbjct: 132 RRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYCEKNGVWYPASKTLAEKAAWKFAEEN 191
Query: 588 GFDVVM 605
G DVV+
Sbjct: 192 GLDVVV 197
>ref|NP_178345.1| putative cinnamoyl-CoA reductase; protein id: At2g02400.1
[Arabidopsis thaliana] gi|25284019|pir||C84436 probable
cinnamoyl-CoA reductase [imported] - Arabidopsis
thaliana gi|3894172|gb|AAC78522.1| putative
cinnamoyl-CoA reductase [Arabidopsis thaliana]
gi|28973736|gb|AAO64184.1| putative cinnamoyl-CoA
reductase [Arabidopsis thaliana]
Length = 318
Score = 187 bits (474), Expect = 1e-46
Identities = 85/181 (46%), Positives = 128/181 (69%), Gaps = 1/181 (0%)
Frame = +3
Query: 63 KVLCVTGASGAIGSWVVKLLLDRGYT-VHATVQDLKDEKETKHLEAMEGAKGRLRLFEMD 239
+ +CVTGA+G IGSW+++ L+++GYT +HA++ D HL + G+ ++++FE D
Sbjct: 4 ETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPT---HLLQLPGSDSKIKIFEAD 60
Query: 240 LLDTNSIATTVKGCNGVIHLACPNVIGEVTDPEKQILEPAIKGTVNVLKAAKEAGAERVV 419
LLD+++I+ + GC GV H+A P + DPEK+++EPA+KGT+NVL+AAK RVV
Sbjct: 61 LLDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVV 120
Query: 420 ATSSISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYPIAKTLAEKAGWEFATETGFDV 599
TSSISA+ P+PNWP E W+DL++CK + +YPI+KTLAEKA WEF+ + G ++
Sbjct: 121 ITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNI 180
Query: 600 V 602
V
Sbjct: 181 V 181
>gb|AAN71762.1| cinnamoyl CoA reductase 2 [Solanum tuberosum]
Length = 221
Score = 181 bits (459), Expect = 7e-45
Identities = 87/178 (48%), Positives = 121/178 (67%)
Frame = +3
Query: 69 LCVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDEKETKHLEAMEGAKGRLRLFEMDLLD 248
+CVTGA G + S +VKLLL + Y VH TV+D D+K HL+ ++ A L+LF+ DLLD
Sbjct: 7 VCVTGAGGYVASSLVKLLLSKDYIVHGTVRDPSDDKYA-HLKNLDKAAENLKLFKADLLD 65
Query: 249 TNSIATTVKGCNGVIHLACPNVIGEVTDPEKQILEPAIKGTVNVLKAAKEAGAERVVATS 428
NS+A +KGCNGV H+ACP G V +PE +++EPA+ GT+NVLKA E +RVV S
Sbjct: 66 PNSLAGAIKGCNGVFHVACPVPSGSVPNPEVELVEPAVNGTLNVLKACSEENIKRVVFVS 125
Query: 429 SISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYPIAKTLAEKAGWEFATETGFDVV 602
S++A + P+WP ++K E CW+D EYCK +Y +KT+AEK W +A + G D+V
Sbjct: 126 SVAAAS-RPHWPKGQVKDETCWSDSEYCKATNNWYCFSKTMAEKEAWSYAKQGGLDMV 182
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 597,394,126
Number of Sequences: 1393205
Number of extensions: 15298723
Number of successful extensions: 103067
Number of sequences better than 10.0: 1341
Number of HSP's better than 10.0 without gapping: 74291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97204
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
