Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005102A_C01 KMC005102A_c01
(666 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565158.1| expressed protein; protein id: At1g77610.1, sup... 177 9e-44
ref|NP_173605.1| glucose 6 phosphate/phosphate translocator, put... 169 2e-41
gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like p... 59 8e-08
ref|NP_196036.1| phosphate/phosphoenolpyruvate translocator - li... 59 8e-08
ref|XP_125868.1| similar to bladder cancer overexpressed protein... 57 2e-07
>ref|NP_565158.1| expressed protein; protein id: At1g77610.1, supported by cDNA:
gi_13430497, supported by cDNA: gi_21281057 [Arabidopsis
thaliana] gi|25354487|pir||F96805 unknown protein
T5M16.20 [imported] - Arabidopsis thaliana
gi|12323396|gb|AAG51677.1|AC010704_21 unknown protein;
76010-78007 [Arabidopsis thaliana]
gi|13430498|gb|AAK25871.1|AF360161_1 unknown protein
[Arabidopsis thaliana] gi|21281058|gb|AAM44935.1|
unknown protein [Arabidopsis thaliana]
Length = 336
Score = 177 bits (450), Expect = 9e-44
Identities = 86/111 (77%), Positives = 92/111 (82%)
Frame = -3
Query: 664 GNGILEWLSIHPYPWIALIIIFSSGVLAFCLNFSISYVIHSPPAVTFNVAGNLKVAVAVL 485
G+GIL W HP PW ALIII SSGVLAFCLNFSI YVIHS AVTFNVAGNLKVAVAV+
Sbjct: 209 GSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVM 268
Query: 484 VSWLIFRNPISYMNSIGCAITLIGCTFYGYVRHMLSQQPAVPGTASDTQDP 332
VSWLIFRNPISYMN++GC ITL+GCTFYGYVRHMLSQQ PGT + P
Sbjct: 269 VSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQ--TPGTPRTPRTP 317
Score = 48.5 bits (114), Expect = 8e-05
Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = -1
Query: 372 SQQFRELPRTPRTPRSKMELLPLV-NDKLDDKV 277
SQQ PRTPRTPRSKMELLPLV NDKL+ KV
Sbjct: 304 SQQTPGTPRTPRTPRSKMELLPLVNNDKLEGKV 336
>ref|NP_173605.1| glucose 6 phosphate/phosphate translocator, putative; protein id:
At1g21870.1 [Arabidopsis thaliana]
gi|6552731|gb|AAF16530.1|AC013482_4 T26F17.9
[Arabidopsis thaliana] gi|29329825|emb|CAD83089.1|
GONST5 Golgi Nucleotide sugar transporter [Arabidopsis
thaliana]
Length = 341
Score = 169 bits (429), Expect = 2e-41
Identities = 82/110 (74%), Positives = 90/110 (81%)
Frame = -3
Query: 661 NGILEWLSIHPYPWIALIIIFSSGVLAFCLNFSISYVIHSPPAVTFNVAGNLKVAVAVLV 482
NGIL+W HP PW ALII+F+SGVLAFCLNFSI YVI S AVTFNVAGNLKVAVAV V
Sbjct: 216 NGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFV 275
Query: 481 SWLIFRNPISYMNSIGCAITLIGCTFYGYVRHMLSQQPAVPGTASDTQDP 332
SW+IFRNPIS MN++GC ITL+GCTFYGYVRHMLSQQ PGT + P
Sbjct: 276 SWMIFRNPISPMNAVGCGITLVGCTFYGYVRHMLSQQQ--PGTPRTPRTP 323
Score = 50.8 bits (120), Expect = 2e-05
Identities = 23/32 (71%), Positives = 27/32 (83%)
Frame = -1
Query: 372 SQQFRELPRTPRTPRSKMELLPLVNDKLDDKV 277
SQQ PRTPRTPR+KMEL+PLVNDKL+ K+
Sbjct: 310 SQQQPGTPRTPRTPRNKMELIPLVNDKLESKI 341
>gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana] gi|20259810|gb|AAM13252.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana]
Length = 309
Score = 58.5 bits (140), Expect = 8e-08
Identities = 32/79 (40%), Positives = 46/79 (57%)
Frame = -3
Query: 634 HPYPWIALIIIFSSGVLAFCLNFSISYVIHSPPAVTFNVAGNLKVAVAVLVSWLIFRNPI 455
H Y WI L++ + V+A+ N V A+T V GN K AVAV++S LIF+NP+
Sbjct: 227 HQYMWILLLV---NSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPV 283
Query: 454 SYMNSIGCAITLIGCTFYG 398
+ M G +IT++G YG
Sbjct: 284 TVMGIGGYSITVLGVVAYG 302
>ref|NP_196036.1| phosphate/phosphoenolpyruvate translocator - like protein; protein
id: At5g04160.1, supported by cDNA: 100777., supported
by cDNA: gi_17064797, supported by cDNA: gi_20259809
[Arabidopsis thaliana] gi|9955571|emb|CAC05498.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana] gi|21536504|gb|AAM60836.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana]
Length = 309
Score = 58.5 bits (140), Expect = 8e-08
Identities = 32/79 (40%), Positives = 46/79 (57%)
Frame = -3
Query: 634 HPYPWIALIIIFSSGVLAFCLNFSISYVIHSPPAVTFNVAGNLKVAVAVLVSWLIFRNPI 455
H Y WI L++ + V+A+ N V A+T V GN K AVAV++S LIF+NP+
Sbjct: 227 HQYMWILLLV---NSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPV 283
Query: 454 SYMNSIGCAITLIGCTFYG 398
+ M G +IT++G YG
Sbjct: 284 TVMGIGGYSITVLGVVAYG 302
>ref|XP_125868.1| similar to bladder cancer overexpressed protein [Homo sapiens] [Mus
musculus]
Length = 313
Score = 57.0 bits (136), Expect = 2e-07
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = -3
Query: 625 PWI--ALIIIFSSGVLAFCLNFSISYVIHSPPAVTFNVAGNLKVAVAVLVSWLIFRNPIS 452
PW AL+++ SG++AF +N SI ++I + VT+N+ G+ K + + +++F++P+S
Sbjct: 218 PWSVSALLMVLLSGIIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLCGGYILFKDPLS 277
Query: 451 YMNSIGCAITLIGCTFYGYVRHMLSQQ 371
+G TL G Y + + LS+Q
Sbjct: 278 VNQGLGILCTLFGILTYTHFK--LSEQ 302
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,401,990
Number of Sequences: 1393205
Number of extensions: 13580827
Number of successful extensions: 33887
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 32406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33855
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
