Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005073A_C01 KMC005073A_c01
(626 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus] 196 2e-49
ref|NP_187317.1| ATP citrate lyase, putative; protein id: At3g06... 194 8e-49
ref|NP_199757.1| ATP citrate lyase; protein id: At5g49460.1, sup... 191 5e-48
gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum] 191 5e-48
dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japoni... 190 1e-47
>emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]
Length = 608
Score = 196 bits (498), Expect = 2e-49
Identities = 94/112 (83%), Positives = 101/112 (89%)
Frame = -2
Query: 625 KDKRVEMLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGM 446
KDKRVE+LQKFAR HFP VKYMEYAV+VE YTL+K+N L+LN+DGAI SLFLDLLAG GM
Sbjct: 496 KDKRVELLQKFARTHFPSVKYMEYAVEVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGM 555
Query: 445 FTDPEISEIVEIGYLNGLFVLARSLGLIGHAFDPKRLKQPLYRHPWEDVLYT 290
FT EI EIVEIGYLNGLFVLARS+GLIGH FD KRLKQPLYRHPWEDVLYT
Sbjct: 556 FTKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607
>ref|NP_187317.1| ATP citrate lyase, putative; protein id: At3g06650.1, supported by
cDNA: gi_15292848 [Arabidopsis thaliana]
gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase,
putative; 38389-41775 [Arabidopsis thaliana]
gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase,
putative; 3734-7120 [Arabidopsis thaliana]
gi|27754223|gb|AAO22565.1| putative ATP citrate lyase
[Arabidopsis thaliana]
Length = 608
Score = 194 bits (493), Expect = 8e-49
Identities = 93/112 (83%), Positives = 102/112 (91%)
Frame = -2
Query: 625 KDKRVEMLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGM 446
+DKRVE+LQKFAR++FP VKYMEYAVQVE YTLSK+N L+LN+DGAI SLFLDLLAG GM
Sbjct: 496 RDKRVELLQKFARSNFPAVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGM 555
Query: 445 FTDPEISEIVEIGYLNGLFVLARSLGLIGHAFDPKRLKQPLYRHPWEDVLYT 290
FT EI EIV+IGYLNGLFVLARS+GLIGH FD KRLKQPLYRHPWEDVLYT
Sbjct: 556 FTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607
>ref|NP_199757.1| ATP citrate lyase; protein id: At5g49460.1, supported by cDNA:
gi_14334787, supported by cDNA: gi_16648643, supported
by cDNA: gi_17065615 [Arabidopsis thaliana]
gi|9759429|dbj|BAB09916.1| ATP citrate lyase
[Arabidopsis thaliana] gi|14334788|gb|AAK59572.1|
putative ATP citrate lyase [Arabidopsis thaliana]
gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B
[Arabidopsis thaliana] gi|17065616|gb|AAL33788.1|
putative ATP citrate lyase [Arabidopsis thaliana]
Length = 608
Score = 191 bits (486), Expect = 5e-48
Identities = 92/112 (82%), Positives = 101/112 (90%)
Frame = -2
Query: 625 KDKRVEMLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGM 446
+DKRVE+LQKFAR++FP VKYMEYAV VE YTLSK+N L+LN+DGAI SLFLDLLAG GM
Sbjct: 496 RDKRVELLQKFARSNFPSVKYMEYAVTVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGM 555
Query: 445 FTDPEISEIVEIGYLNGLFVLARSLGLIGHAFDPKRLKQPLYRHPWEDVLYT 290
FT EI EIV+IGYLNGLFVLARS+GLIGH FD KRLKQPLYRHPWEDVLYT
Sbjct: 556 FTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607
>gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]
Length = 608
Score = 191 bits (486), Expect = 5e-48
Identities = 92/112 (82%), Positives = 101/112 (90%)
Frame = -2
Query: 625 KDKRVEMLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGM 446
+DKRVE+LQ +AR +FP VKYMEYAVQVE YTLSK+N L+LN+DGAI +LFLDLLAG GM
Sbjct: 496 RDKRVEILQLYARDNFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGTLFLDLLAGSGM 555
Query: 445 FTDPEISEIVEIGYLNGLFVLARSLGLIGHAFDPKRLKQPLYRHPWEDVLYT 290
FT PEI EIVEIGYLNGLFVLARS+GLIGH FD KRLKQPLYRHPWEDVLYT
Sbjct: 556 FTKPEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607
>dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japonica cultivar-group)]
gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase
[Oryza sativa (japonica cultivar-group)]
Length = 608
Score = 190 bits (483), Expect = 1e-47
Identities = 90/112 (80%), Positives = 100/112 (88%)
Frame = -2
Query: 625 KDKRVEMLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGM 446
+DKRV++LQK+A HFP VKYMEYAVQVE YTLSK+N L+LN+DGAI SLFLDLL+G GM
Sbjct: 496 RDKRVQLLQKYAHTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLSGSGM 555
Query: 445 FTDPEISEIVEIGYLNGLFVLARSLGLIGHAFDPKRLKQPLYRHPWEDVLYT 290
F+ EI EIVEIGYLNGLFVLARS+GLIGH FD KRLKQPLYRHPWEDVLYT
Sbjct: 556 FSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 506,565,290
Number of Sequences: 1393205
Number of extensions: 10780360
Number of successful extensions: 26441
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 25607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26413
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
