Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005019A_C04 KMC005019A_c04
(1312 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA29056.1| Polygalacturonase-inhibiting protein [Citrus sp.... 301 2e-80
dbj|BAB83520.1| polygalacturonase-inhibitor protein [Citrus sp. ... 300 3e-80
dbj|BAB83521.1| polygalacturonase-inhibitor protein [Citrus sp. ... 300 3e-80
dbj|BAA31843.1| polygalacturonase inhibitor (PGIP) [Citrus iyo] 300 3e-80
dbj|BAB85785.1| polygalacturonase-inhibiting protein [Citrus hys... 300 3e-80
>dbj|BAA29056.1| Polygalacturonase-inhibiting protein [Citrus sp. cv. Sainumphung]
Length = 327
Score = 301 bits (770), Expect = 2e-80
Identities = 164/283 (57%), Positives = 193/283 (67%)
Frame = -3
Query: 1295 FLLFMLLFSPVAFSGRCHPQDKKVLLQIKKDFNSPYLLASWDPKTACCDWYCVECDPKTH 1116
F L SP + S C+P DKKVLL+ KK N+PY+LASW+PKT CCDWYCV CD T+
Sbjct: 10 FFFLCLCISP-SLSDLCNPNDKKVLLKFKKSLNNPYVLASWNPKTDCCDWYCVTCDLTTN 68
Query: 1115 RITSLIISSSIPDTNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQPAIAKLTKLKSLSI 936
RI SL I + +L G IPP VGDLPYLE L FHKLP LTGPIQPAIAKL LK+L I
Sbjct: 69 RINSLTIFAG----DLPGQIPPEVGDLPYLEILMFHKLPSLTGPIQPAIAKLKNLKTLRI 124
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPAS 756
+WTN+SGP+PDF+ QL NL L LSFNNLSG IP SLS+L KL +L+LDRNKLTG IP S
Sbjct: 125 SWTNISGPVPDFIRQLTNLTFLELSFNNLSGTIPGSLSKLQKLGALHLDRNKLTGSIPES 184
Query: 755 FGFFKKPGPNLFLSHNQLSGPIPSSLGQLDPERIDFSRNKLTGNASLPFCARPKDTTT*P 576
FG F P+L+LSHNQLSG IP+SLG +D ID SRNKL G+AS F
Sbjct: 185 FGTFTGSIPDLYLSHNQLSGKIPASLGSMDSNTIDLSRNKLEGDASFLFGLNKTTQRIDV 244
Query: 575 FQELAFI*LYPKWSFR*A*HWLDLNHNQIHGSIPVGLSAVPNL 447
+ L L K F + LDLNHN+I GSIP ++++ NL
Sbjct: 245 SRNLLEFNL-SKVEFPQSLTNLDLNHNKIFGSIPAQITSLENL 286
Score = 49.7 bits (117), Expect = 1e-04
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = -1
Query: 613 LFAHDQKTQLLDLSRNLLSFDFIPSGVSVKLDTGWILITIRFMAAFLLDSLRFQICSHSM 434
LF ++ TQ +D+SRNLL F+ K++ L + + S+ QI S
Sbjct: 232 LFGLNKTTQRIDVSRNLLEFNLS------KVEFPQSLTNLDLNHNKIFGSIPAQITSLEN 285
Query: 433 L-----SYNLLSGKIPQAGELGKFDKFSYFHYQNLCGTPL 329
L SYN L G IP G+L F YFH + LCG PL
Sbjct: 286 LGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPL 325
Score = 43.5 bits (101), Expect = 0.007
Identities = 51/193 (26%), Positives = 71/193 (36%), Gaps = 67/193 (34%)
Frame = -3
Query: 1124 KTHRITSLIISSSIPD---------------TNLSGPIPPSVGDLPYLEYLDFHKLPKLT 990
KT RI+ IS +PD NLSG IP S+ L L L + KLT
Sbjct: 120 KTLRISWTNISGPVPDFIRQLTNLTFLELSFNNLSGTIPGSLSKLQKLGALHLDR-NKLT 178
Query: 989 GPIQPAIAKLT-KLKSLSITWTNVSGPIPDFLAQL------------------------- 888
G I + T + L ++ +SG IP L +
Sbjct: 179 GSIPESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDSNTIDLSRNKLEGDASFLFGLNKT 238
Query: 887 ---------------------KNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTG 771
++L +L L+ N + G IPA ++ L L LN+ N+L G
Sbjct: 239 TQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCG 298
Query: 770 PIPA-----SFGF 747
PIP SFG+
Sbjct: 299 PIPVGGKLQSFGY 311
>dbj|BAB83520.1| polygalacturonase-inhibitor protein [Citrus sp. cv. Sainumphung]
Length = 329
Score = 300 bits (769), Expect = 3e-80
Identities = 163/283 (57%), Positives = 194/283 (67%)
Frame = -3
Query: 1295 FLLFMLLFSPVAFSGRCHPQDKKVLLQIKKDFNSPYLLASWDPKTACCDWYCVECDPKTH 1116
F L SP + S C+P DKKVLL+ KK N+PY+LASW+PKT CCDWYCV CD T+
Sbjct: 10 FFFLCLCISP-SLSDLCNPNDKKVLLKFKKSLNNPYVLASWNPKTGCCDWYCVTCDLTTN 68
Query: 1115 RITSLIISSSIPDTNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQPAIAKLTKLKSLSI 936
RI SL + + +L G IPP VGDLPYLE L FHKLP LTGPIQPAIAKL LK+L I
Sbjct: 69 RINSLTVFAG----DLPGQIPPEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRI 124
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPAS 756
+WTN+SGP+PDF++QL NL L LSFNNLSG IP SLS+L KL +L+LDRNKLTG IP S
Sbjct: 125 SWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPGSLSKLQKLGALHLDRNKLTGSIPES 184
Query: 755 FGFFKKPGPNLFLSHNQLSGPIPSSLGQLDPERIDFSRNKLTGNASLPFCARPKDTTT*P 576
FG F P+L+LSHNQLSG IP+SLG +D ID SRNKL G+AS F
Sbjct: 185 FGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDV 244
Query: 575 FQELAFI*LYPKWSFR*A*HWLDLNHNQIHGSIPVGLSAVPNL 447
+ L L K F + LDLNHN+I GSIP ++++ NL
Sbjct: 245 SRNLLEFNL-SKVEFPQSLTNLDLNHNKIFGSIPAQITSLENL 286
Score = 55.1 bits (131), Expect = 2e-06
Identities = 38/104 (36%), Positives = 51/104 (48%), Gaps = 5/104 (4%)
Frame = -1
Query: 613 LFAHDQKTQLLDLSRNLLSFDFIPSGVSVKLDTGWILITIRFMAAFLLDSLRFQICSHSM 434
LF ++ TQ +D+SRNLL F+ K++ L + + S+ QI S
Sbjct: 232 LFGLNKTTQRIDVSRNLLEFNLS------KVEFPQSLTNLDLNHNKIFGSIPAQITSLEN 285
Query: 433 L-----SYNLLSGKIPQAGELGKFDKFSYFHYQNLCGTPLPNCK 317
L SYN L G IP G+L F YFH + LCG PL +CK
Sbjct: 286 LGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESCK 329
Score = 44.3 bits (103), Expect = 0.004
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Frame = -3
Query: 1094 SSSIPD-----TNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQP--AIAKLTKLKSLSI 936
+ SIPD LSG IP S+G + + +D + KL G + K T+ +S
Sbjct: 189 TGSIPDLYLSHNQLSGKIPASLGSMDF-NTIDLSR-NKLEGDASFLFGLNKTTQRIDVSR 246
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPA- 759
+ +F L NLD L+ N + G IPA ++ L L LN+ N+L GPIP
Sbjct: 247 NLLEFNLSKVEFPQSLTNLD---LNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG 303
Query: 758 ----SFGF 747
SFG+
Sbjct: 304 GKLQSFGY 311
>dbj|BAB83521.1| polygalacturonase-inhibitor protein [Citrus sp. cv. Sainumphung]
Length = 329
Score = 300 bits (769), Expect = 3e-80
Identities = 164/283 (57%), Positives = 194/283 (67%)
Frame = -3
Query: 1295 FLLFMLLFSPVAFSGRCHPQDKKVLLQIKKDFNSPYLLASWDPKTACCDWYCVECDPKTH 1116
F L SP + S C+P DKKVLL+ KK N+PY+LASW+PKT CCDWYCV CD T+
Sbjct: 10 FFFLCLCISP-SLSDLCNPNDKKVLLKFKKSLNNPYVLASWNPKTDCCDWYCVTCDLTTN 68
Query: 1115 RITSLIISSSIPDTNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQPAIAKLTKLKSLSI 936
RI SL I + +L G IPP VGDLPYLE L FHKLP LTGPIQPAIAKL LK+L I
Sbjct: 69 RINSLTIFAG----DLPGQIPPEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRI 124
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPAS 756
+WTN+SGP+PDF++QL NL L LSFNNLSG IP SLS+L KL +L+LDRNKLTG IP S
Sbjct: 125 SWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPGSLSKLQKLGALHLDRNKLTGSIPES 184
Query: 755 FGFFKKPGPNLFLSHNQLSGPIPSSLGQLDPERIDFSRNKLTGNASLPFCARPKDTTT*P 576
FG F P+L+LSHNQLSG IP+SLG +D ID SRNKL G+AS F
Sbjct: 185 FGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDV 244
Query: 575 FQELAFI*LYPKWSFR*A*HWLDLNHNQIHGSIPVGLSAVPNL 447
+ L L K F + LDLNHN+I GSIP ++++ NL
Sbjct: 245 SRNLLEFNL-SKVEFPQSLTNLDLNHNEIFGSIPAQITSLENL 286
Score = 55.1 bits (131), Expect = 2e-06
Identities = 38/104 (36%), Positives = 51/104 (48%), Gaps = 5/104 (4%)
Frame = -1
Query: 613 LFAHDQKTQLLDLSRNLLSFDFIPSGVSVKLDTGWILITIRFMAAFLLDSLRFQICSHSM 434
LF ++ TQ +D+SRNLL F+ K++ L + + S+ QI S
Sbjct: 232 LFGLNKTTQRIDVSRNLLEFNLS------KVEFPQSLTNLDLNHNEIFGSIPAQITSLEN 285
Query: 433 L-----SYNLLSGKIPQAGELGKFDKFSYFHYQNLCGTPLPNCK 317
L SYN L G IP G+L F YFH + LCG PL +CK
Sbjct: 286 LGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESCK 329
Score = 44.3 bits (103), Expect = 0.004
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Frame = -3
Query: 1094 SSSIPD-----TNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQP--AIAKLTKLKSLSI 936
+ SIPD LSG IP S+G + + +D + KL G + K T+ +S
Sbjct: 189 TGSIPDLYLSHNQLSGKIPASLGSMDF-NTIDLSR-NKLEGDASFLFGLNKTTQRIDVSR 246
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPA- 759
+ +F L NLD L+ N + G IPA ++ L L LN+ N+L GPIP
Sbjct: 247 NLLEFNLSKVEFPQSLTNLD---LNHNEIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG 303
Query: 758 ----SFGF 747
SFG+
Sbjct: 304 GKLQSFGY 311
>dbj|BAA31843.1| polygalacturonase inhibitor (PGIP) [Citrus iyo]
Length = 327
Score = 300 bits (768), Expect = 3e-80
Identities = 164/283 (57%), Positives = 194/283 (67%)
Frame = -3
Query: 1295 FLLFMLLFSPVAFSGRCHPQDKKVLLQIKKDFNSPYLLASWDPKTACCDWYCVECDPKTH 1116
F L SP + S C+P DKKVLL+ KK N+PY+LASW+PKT CCDWYCV CD T+
Sbjct: 10 FFFLSLCISP-SLSDLCNPNDKKVLLKFKKSLNNPYVLASWNPKTDCCDWYCVTCDLTTN 68
Query: 1115 RITSLIISSSIPDTNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQPAIAKLTKLKSLSI 936
RI SL I + +L G IPP VGDLPYLE L FHKLP LTGPIQPAIAKL LK+L I
Sbjct: 69 RINSLTIFAG----DLPGQIPPEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRI 124
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPAS 756
+WTN+SGP+PDF++QL NL L LSFNNLSG IP SLS+L KL +L+LDRNKLTG IP S
Sbjct: 125 SWTNISGPVPDFISQLTNLTFLELSFNNLSGAIPGSLSKLQKLGALHLDRNKLTGSIPES 184
Query: 755 FGFFKKPGPNLFLSHNQLSGPIPSSLGQLDPERIDFSRNKLTGNASLPFCARPKDTTT*P 576
FG F P+L+LSHNQLSG IP+SLG +D ID SRNKL G+AS F
Sbjct: 185 FGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDV 244
Query: 575 FQELAFI*LYPKWSFR*A*HWLDLNHNQIHGSIPVGLSAVPNL 447
+ L L K F + LDLNHN+I GSIP ++++ NL
Sbjct: 245 SRNLLEFNL-SKVEFPESLTNLDLNHNKIFGSIPAQITSLENL 286
Score = 49.3 bits (116), Expect = 1e-04
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = -1
Query: 613 LFAHDQKTQLLDLSRNLLSFDFIPSGVSVKLDTGWILITIRFMAAFLLDSLRFQICSHSM 434
LF ++ TQ +D+SRNLL F+ K++ L + + S+ QI S
Sbjct: 232 LFGLNKTTQRIDVSRNLLEFNLS------KVEFPESLTNLDLNHNKIFGSIPAQITSLEN 285
Query: 433 L-----SYNLLSGKIPQAGELGKFDKFSYFHYQNLCGTPL 329
L SYN L G IP G+L F YFH + LCG PL
Sbjct: 286 LGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPL 325
Score = 44.3 bits (103), Expect = 0.004
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Frame = -3
Query: 1094 SSSIPD-----TNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQP--AIAKLTKLKSLSI 936
+ SIPD LSG IP S+G + + +D + KL G + K T+ +S
Sbjct: 189 TGSIPDLYLSHNQLSGKIPASLGSMDF-NTIDLSR-NKLEGDASFLFGLNKTTQRIDVSR 246
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPA- 759
+ +F L NLD L+ N + G IPA ++ L L LN+ N+L GPIP
Sbjct: 247 NLLEFNLSKVEFPESLTNLD---LNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG 303
Query: 758 ----SFGF 747
SFG+
Sbjct: 304 GKLQSFGY 311
>dbj|BAB85785.1| polygalacturonase-inhibiting protein [Citrus hystrix]
Length = 327
Score = 300 bits (768), Expect = 3e-80
Identities = 164/283 (57%), Positives = 196/283 (68%), Gaps = 1/283 (0%)
Frame = -3
Query: 1292 LLFML-LFSPVAFSGRCHPQDKKVLLQIKKDFNSPYLLASWDPKTACCDWYCVECDPKTH 1116
L+F+L LF P + S C+P DKKVLL+ KK N+PY+LASW+PKT CCDWYCV CD T+
Sbjct: 9 LIFILSLFIPPSLSDLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCDWYCVTCDLSTN 68
Query: 1115 RITSLIISSSIPDTNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQPAIAKLTKLKSLSI 936
RI SL I + +L G IP VGDLPYLE L FHKLP LTGPIQPAIAKL LK+L I
Sbjct: 69 RINSLTIFAG----DLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRI 124
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPAS 756
+WTN+SGP+PDF++QL NL L LSFNNLSG IP+SLS+L KL +L+LDRNKLTG IP S
Sbjct: 125 SWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPES 184
Query: 755 FGFFKKPGPNLFLSHNQLSGPIPSSLGQLDPERIDFSRNKLTGNASLPFCARPKDTTT*P 576
FG F P+L+LSHNQLSG IP+SLG +D ID SRNKL G+AS K T
Sbjct: 185 FGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASF-LIGLNKTTQRID 243
Query: 575 FQELAFI*LYPKWSFR*A*HWLDLNHNQIHGSIPVGLSAVPNL 447
K F + LDLNHN+I GSIP ++++ NL
Sbjct: 244 VSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSIPAQITSLENL 286
Score = 47.0 bits (110), Expect = 7e-04
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = -1
Query: 613 LFAHDQKTQLLDLSRNLLSFDFIPSGVSVKLDTGWILITIRFMAAFLLDSLRFQICSHSM 434
L ++ TQ +D+SRNLL F+ K++ L + + S+ QI S
Sbjct: 232 LIGLNKTTQRIDVSRNLLEFNLS------KVEFPESLTNLDLNHNKIFGSIPAQITSLEN 285
Query: 433 L-----SYNLLSGKIPQAGELGKFDKFSYFHYQNLCGTPL 329
L SYN L G IP G+L F YFH + LCG PL
Sbjct: 286 LGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPL 325
Score = 43.5 bits (101), Expect = 0.007
Identities = 42/128 (32%), Positives = 59/128 (45%), Gaps = 12/128 (9%)
Frame = -3
Query: 1094 SSSIPD-----TNLSGPIPPSVGDLPYLEYLDFHKLPKLTGPIQPAIA--KLTKLKSLSI 936
+ S PD LSG IP S+G + + +D + KL G I K T+ +S
Sbjct: 189 TGSTPDLYLSHNQLSGKIPASLGSMDF-NTIDLSR-NKLEGDASFLIGLNKTTQRIDVSR 246
Query: 935 TWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPKLLSLNLDRNKLTGPIPA- 759
+ +F L NLD L+ N + G IPA ++ L L LN+ N+L GPIP
Sbjct: 247 NLLEFNLSKVEFPESLTNLD---LNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG 303
Query: 758 ----SFGF 747
SFG+
Sbjct: 304 GKLQSFGY 311
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,166,971,613
Number of Sequences: 1393205
Number of extensions: 28248162
Number of successful extensions: 218066
Number of sequences better than 10.0: 3042
Number of HSP's better than 10.0 without gapping: 109221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177782
length of database: 448,689,247
effective HSP length: 126
effective length of database: 273,145,417
effective search space used: 84675079270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
