Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004928A_C01 KMC004928A_c01
(553 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C85064 hypothetical protein AT4g05110 [imported] - Arabidop... 60 1e-08
ref|NP_192421.1| putative protein; protein id: At4g05120.1, supp... 60 1e-08
ref|NP_192420.2| putative protein; protein id: At4g05110.1, supp... 60 1e-08
ref|NP_187610.1| hypothetical protein; protein id: At3g09990.1, ... 58 9e-08
gb|AAL25095.1|AF426399_1 putative equilibrative nucleoside trans... 58 9e-08
>pir||C85064 hypothetical protein AT4g05110 [imported] - Arabidopsis thaliana
gi|7267270|emb|CAB81053.1| putative protein [Arabidopsis
thaliana]
Length = 394
Score = 60.5 bits (145), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 551 NALGNLLVLFLLGGIFAGVTLDWLWLIGK 465
NALGNLLV+FLLGGIFAGV LDWLWLIGK
Sbjct: 362 NALGNLLVIFLLGGIFAGVALDWLWLIGK 390
>ref|NP_192421.1| putative protein; protein id: At4g05120.1, supported by cDNA:
gi_16518992 [Arabidopsis thaliana]
gi|25371486|pir||D85064 hypothetical protein AT4g05120
[imported] - Arabidopsis thaliana
gi|7267271|emb|CAB81054.1| putative protein [Arabidopsis
thaliana] gi|16518993|gb|AAL25096.1|AF426400_1 putative
equilibrative nucleoside transporter ENT3 [Arabidopsis
thaliana]
Length = 418
Score = 60.5 bits (145), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 551 NALGNLLVLFLLGGIFAGVTLDWLWLIGK 465
NALGNLLV+FLLGGIFAGV LDWLWLIGK
Sbjct: 386 NALGNLLVIFLLGGIFAGVALDWLWLIGK 414
>ref|NP_192420.2| putative protein; protein id: At4g05110.1, supported by cDNA:
gi_16518996 [Arabidopsis thaliana]
gi|16518997|gb|AAL25098.1|AF426402_1 putative
equilibrative nucleoside transporter ENT6 [Arabidopsis
thaliana]
Length = 418
Score = 60.5 bits (145), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 551 NALGNLLVLFLLGGIFAGVTLDWLWLIGK 465
NALGNLLV+FLLGGIFAGV LDWLWLIGK
Sbjct: 386 NALGNLLVIFLLGGIFAGVALDWLWLIGK 414
>ref|NP_187610.1| hypothetical protein; protein id: At3g09990.1, supported by cDNA:
gi_16518990 [Arabidopsis thaliana]
gi|6143877|gb|AAF04424.1|AC010927_17 hypothetical
protein [Arabidopsis thaliana]
Length = 417
Score = 57.8 bits (138), Expect = 9e-08
Identities = 23/31 (74%), Positives = 27/31 (86%)
Frame = -3
Query: 551 NALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 459
NALGNLLVL++ GG+FAGV DWLWL+GK W
Sbjct: 387 NALGNLLVLYICGGMFAGVACDWLWLVGKDW 417
>gb|AAL25095.1|AF426399_1 putative equilibrative nucleoside transporter ENT2 [Arabidopsis
thaliana]
Length = 417
Score = 57.8 bits (138), Expect = 9e-08
Identities = 23/31 (74%), Positives = 27/31 (86%)
Frame = -3
Query: 551 NALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 459
NALGNLLVL++ GG+FAGV DWLWL+GK W
Sbjct: 387 NALGNLLVLYICGGMFAGVACDWLWLVGKDW 417
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 422,918,714
Number of Sequences: 1393205
Number of extensions: 8146836
Number of successful extensions: 19171
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19169
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
