Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004891A_C01 KMC004891A_c01
(631 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181647.1| CPDK-related protein kinase; protein id: At2g41... 77 2e-13
ref|NP_191235.1| calcium-dependent protein kinase-like; protein ... 77 2e-13
dbj|BAC16472.1| putative calcium/calmodulin-dependent protein ki... 70 3e-11
gb|AAK54157.1|AF368282_1 CaMK1 [Oryza sativa] 68 9e-11
dbj|BAC10126.1| putative CDPK(calcium-dependent protein kinase)-... 68 1e-10
>ref|NP_181647.1| CPDK-related protein kinase; protein id: At2g41140.1, supported by
cDNA: gi_16904217, supported by cDNA: gi_5020365
[Arabidopsis thaliana] gi|7446421|pir||T02105
calcium-dependent protein kinase (EC 2.7.1.-) T3K9.9 -
Arabidopsis thaliana gi|3402722|gb|AAD12016.1|
CPDK-related protein kinase [Arabidopsis thaliana]
gi|5020366|gb|AAD38058.1|AF153351_1 CDPK-related kinase
1 [Arabidopsis thaliana]
gi|16904218|gb|AAL30816.1|AF435448_1
calcium/calmodulin-dependent protein kinase CaMK3
[Arabidopsis thaliana]
Length = 576
Score = 76.6 bits (187), Expect = 2e-13
Identities = 35/37 (94%), Positives = 36/37 (96%)
Frame = -1
Query: 631 PIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 521
P+HVVLQDWIRHSDGKLSFLGFVRLLHGVSSRT QKA
Sbjct: 540 PVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTLQKA 576
>ref|NP_191235.1| calcium-dependent protein kinase-like; protein id: At3g56760.1
[Arabidopsis thaliana] gi|11357213|pir||T51264
calcium-dependent protein kinase-like - Arabidopsis
thaliana gi|9662995|emb|CAC00739.1| calcium-dependent
protein kinase-like [Arabidopsis thaliana]
Length = 577
Score = 76.6 bits (187), Expect = 2e-13
Identities = 35/37 (94%), Positives = 36/37 (96%)
Frame = -1
Query: 631 PIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 521
P+HVVLQDWIRHSDGKLSFLGFVRLLHGVSSRT QKA
Sbjct: 541 PVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTLQKA 577
>dbj|BAC16472.1| putative calcium/calmodulin-dependent protein kinase CaMK [Oryza
sativa (japonica cultivar-group)]
gi|27261109|dbj|BAC45222.1| putative
calcium/calmodulin-dependent protein kinase CaMK [Oryza
sativa (japonica cultivar-group)]
Length = 594
Score = 69.7 bits (169), Expect = 3e-11
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 631 PIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 521
P+HVVLQDWIRH+DGKLSFLGF++LLHGVSSR+ KA
Sbjct: 558 PLHVVLQDWIRHADGKLSFLGFIKLLHGVSSRSIPKA 594
>gb|AAK54157.1|AF368282_1 CaMK1 [Oryza sativa]
Length = 597
Score = 68.2 bits (165), Expect = 9e-11
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1
Query: 631 PIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQK 524
P+HVVLQDWIRH DGKLSFLGF++LLHGVSSRT K
Sbjct: 561 PLHVVLQDWIRHPDGKLSFLGFMKLLHGVSSRTIPK 596
>dbj|BAC10126.1| putative CDPK(calcium-dependent protein kinase)-related protein
kinase [Oryza sativa (japonica cultivar-group)]
gi|22296402|dbj|BAC10170.1| putative
CDPK(calcium-dependent protein kinase)-related protein
kinase [Oryza sativa (japonica cultivar-group)]
Length = 564
Score = 67.8 bits (164), Expect = 1e-10
Identities = 29/36 (80%), Positives = 34/36 (93%)
Frame = -1
Query: 631 PIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQK 524
P+HVVLQDWIRH+DGKLSFLGFV+LLHG+SSR+ K
Sbjct: 527 PLHVVLQDWIRHTDGKLSFLGFVKLLHGMSSRSLSK 562
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,646,855
Number of Sequences: 1393205
Number of extensions: 10695536
Number of successful extensions: 26057
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 25318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26050
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
