Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004841A_C01 KMC004841A_c01
(565 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB95832.1| NAD-dependent malic enzyme (malate oxidoreductas... 107 1e-22
gb|AAC13636.2| F6N23.16 gene product [Arabidopsis thaliana] 93 2e-18
ref|NP_191966.1| putative malate oxidoreductase; protein id: At4... 93 2e-18
gb|AAM91599.1| putative malate oxidoreductase [Arabidopsis thali... 93 2e-18
sp|P37225|MAON_SOLTU NAD-DEPENDENT MALIC ENZYME 59 KDA ISOFORM, ... 91 1e-17
>emb|CAB95832.1| NAD-dependent malic enzyme (malate oxidoreductase) [Cicer
arietinum]
Length = 303
Score = 107 bits (266), Expect = 1e-22
Identities = 51/55 (92%), Positives = 53/55 (95%)
Frame = -1
Query: 565 EVGAAVLRAAVEEDLADGRDDVGPRELAHMSKEETVEYVRHNMWFPVYSPLVHEK 401
EVGAAVLRAAVEEDLA+G+ DVGPRELAHMSKEETVEYVR NMWFPVYSPLVHEK
Sbjct: 249 EVGAAVLRAAVEEDLAEGQGDVGPRELAHMSKEETVEYVRRNMWFPVYSPLVHEK 303
>gb|AAC13636.2| F6N23.16 gene product [Arabidopsis thaliana]
Length = 606
Score = 93.2 bits (230), Expect = 2e-18
Identities = 41/55 (74%), Positives = 49/55 (88%)
Frame = -1
Query: 565 EVGAAVLRAAVEEDLADGRDDVGPRELAHMSKEETVEYVRHNMWFPVYSPLVHEK 401
EVGAAVLRAAV +D+A+G DVGP++L+HMSKE+TV Y+ NMWFPVYSPLVHEK
Sbjct: 552 EVGAAVLRAAVTDDIAEGHGDVGPKDLSHMSKEDTVNYITRNMWFPVYSPLVHEK 606
>ref|NP_191966.1| putative malate oxidoreductase; protein id: At4g00570.1
[Arabidopsis thaliana] gi|7431221|pir||T01221 malate
dehydrogenase (decarboxylating) (EC 1.1.1.39) precursor,
mitochondrial - Arabidopsis thaliana
gi|7267396|emb|CAB80866.1| putative malate
oxidoreductase [Arabidopsis thaliana]
Length = 606
Score = 93.2 bits (230), Expect = 2e-18
Identities = 41/55 (74%), Positives = 49/55 (88%)
Frame = -1
Query: 565 EVGAAVLRAAVEEDLADGRDDVGPRELAHMSKEETVEYVRHNMWFPVYSPLVHEK 401
EVGAAVLRAAV +D+A+G DVGP++L+HMSKE+TV Y+ NMWFPVYSPLVHEK
Sbjct: 552 EVGAAVLRAAVTDDIAEGHGDVGPKDLSHMSKEDTVNYITRNMWFPVYSPLVHEK 606
>gb|AAM91599.1| putative malate oxidoreductase [Arabidopsis thaliana]
gi|23197734|gb|AAN15394.1| putative malate
oxidoreductase [Arabidopsis thaliana]
gi|25083273|gb|AAN72057.1| putative malate
oxidoreductase [Arabidopsis thaliana]
Length = 607
Score = 93.2 bits (230), Expect = 2e-18
Identities = 41/55 (74%), Positives = 49/55 (88%)
Frame = -1
Query: 565 EVGAAVLRAAVEEDLADGRDDVGPRELAHMSKEETVEYVRHNMWFPVYSPLVHEK 401
EVGAAVLRAAV +D+A+G DVGP++L+HMSKE+TV Y+ NMWFPVYSPLVHEK
Sbjct: 553 EVGAAVLRAAVTDDIAEGHGDVGPKDLSHMSKEDTVNYITRNMWFPVYSPLVHEK 607
>sp|P37225|MAON_SOLTU NAD-DEPENDENT MALIC ENZYME 59 KDA ISOFORM, MITOCHONDRIAL PRECURSOR
(NAD-ME) gi|1076666|pir||A53318 malate dehydrogenase
(decarboxylating) (EC 1.1.1.39) 59K chain precursor,
mitochondrial - potato gi|438131|emb|CAA80547.1|
precursor of the 59kDa subunit of the mitochondrial
NAD+-dependent malic enzyme [Solanum tuberosum]
Length = 601
Score = 90.9 bits (224), Expect = 1e-17
Identities = 42/54 (77%), Positives = 47/54 (86%)
Frame = -1
Query: 565 EVGAAVLRAAVEEDLADGRDDVGPRELAHMSKEETVEYVRHNMWFPVYSPLVHE 404
EVGAAVLRAAV EDLA+G DVG +EL HMSKEET+E+VR NMW+PVY PLVHE
Sbjct: 548 EVGAAVLRAAVAEDLAEGHGDVGVKELQHMSKEETIEHVRQNMWYPVYGPLVHE 601
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,044,944
Number of Sequences: 1393205
Number of extensions: 11644342
Number of successful extensions: 33754
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 31579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33663
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
