Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004766A_C01 KMC004766A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173233.1| WAK-like kinase (WLK); protein id: At1g17910.1 ... 59 2e-08
ref|NP_173063.1| WAK-like kinase (WLK); protein id: At1g16120.1 ... 57 2e-07
ref|NP_178085.1| WAK-like kinase (WLK); protein id: At1g79670.1,... 55 4e-07
ref|NP_194840.1| WAK-like kinase (WLK); protein id: At4g31110.1 ... 55 5e-07
pir||C86296 hypothetical protein T24D18.23 [imported] - Arabidop... 55 6e-07
>ref|NP_173233.1| WAK-like kinase (WLK); protein id: At1g17910.1 [Arabidopsis
thaliana] gi|25287661|pir||C86314 hypothetical protein
F2H15.13 - Arabidopsis thaliana
gi|9665068|gb|AAF97270.1|AC034106_13 Contains similarity
to wall-associated kinase 2 from Arabidopsis thaliana
gb|AJ012423 and contains a Eukaryotic protein kinase
PF|00069 domain
Length = 764
Score = 59.3 bits (142), Expect = 2e-08
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 309 CNSRCGGVWIAYPFGMGDPKCYADEWFEIECRNTSRQGSK-P*LKWINLEITNI 467
C +CG + I +PFG+G+ CY DEW+++ECR ++ G P L IN+E+ NI
Sbjct: 26 CTHKCGDIQIPFPFGIGEIGCYLDEWYQVECRPSATSGKVFPFLPKINMEVVNI 79
>ref|NP_173063.1| WAK-like kinase (WLK); protein id: At1g16120.1 [Arabidopsis
thaliana] gi|25287664|pir||H86295 hypothetical protein
T24D18.20 [imported] - Arabidopsis thaliana
gi|6587816|gb|AAF18507.1|AC010924_20 Contains similarity
to gb|AJ009696 wall-associated kinase 1 from Arabidopsis
thaliana and contains a protein kinase PF|00069 domain
Length = 730
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/101 (30%), Positives = 50/101 (48%), Gaps = 5/101 (4%)
Frame = +3
Query: 198 TTTMFLQLSSYMIVLIIVSMSPLASAQLDYPDTVNPDCNSRCGGVWIAYPFGMGDPKCYA 377
T T Q ++ ++++ S A+ ++ + CN CGG+ I +PFG+G CY
Sbjct: 3 TKTSIFQFIVASVLTLLINDSSAATPPPPISNS-STSCNKTCGGISIPFPFGIGGKDCYL 61
Query: 378 DEWFEIECRNTSRQGSK--P*LKWINLEITNI---DSGSSY 485
+ W+E+ C T+ + P L IN E+ NI DS Y
Sbjct: 62 NGWYEVICNTTTSDSNTTVPLLSMINREVVNISLPDSNEPY 102
>ref|NP_178085.1| WAK-like kinase (WLK); protein id: At1g79670.1, supported by cDNA:
gi_19310446 [Arabidopsis thaliana]
gi|19310447|gb|AAL84959.1| At1g79670/F20B17_27
[Arabidopsis thaliana]
Length = 751
Score = 55.5 bits (132), Expect = 4e-07
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Frame = +3
Query: 213 LQLSSYMIVLIIVSMSPLASAQLDYPDTVNPDCNSRCGGVWIAYPFGMGDPKCYADEWFE 392
L S + +L + PL + P + + CN CGG+ I +PFG+G C+ ++W+E
Sbjct: 6 LFFSVLLSILTLFINGPLITTAQSPPSS-STSCNRICGGIEIPFPFGIGRRDCFLNDWYE 64
Query: 393 IECRN-TSRQGSKP*LKWINLEI------TNIDSGSSYLYIMKPV 506
+ C + TS + P L IN E+ ++IDS ++I PV
Sbjct: 65 VVCNSTTSGKSLAPFLYKINRELVSITLRSSIDSSYGVVHIKSPV 109
>ref|NP_194840.1| WAK-like kinase (WLK); protein id: At4g31110.1 [Arabidopsis
thaliana] gi|7486495|pir||T10665 hypothetical protein
F6E21.30 - Arabidopsis thaliana
gi|7270013|emb|CAB79829.1| putative protein [Arabidopsis
thaliana]
Length = 855
Score = 55.1 bits (131), Expect = 5e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +3
Query: 192 SLTTTMFLQLSSYMIVLIIVSMSPLASAQLDYPDTVNPDCNSRCGGVWIAYPFGMGDPKC 371
S + FL L +M++L+++ S A C CGG+ I YPFG+G C
Sbjct: 5 STNCSFFLNL--FMLLLLLIFYSADA-------------CQRECGGISIPYPFGIGKD-C 48
Query: 372 YADEWFEIECRNTSRQGSKP*LKWINLEITNIDSGSS 482
++++EIECRNT+ + P L +IN E+ +I S+
Sbjct: 49 CLEKYYEIECRNTTSRKLVPLLSFINKEVVSISLPSA 85
>pir||C86296 hypothetical protein T24D18.23 [imported] - Arabidopsis thaliana
gi|6587819|gb|AAF18510.1|AC010924_23 Contains similarity
to gb|AJ009695 wall-associated kinase 4 from Arabidopsis
thaliana and contains a protein kinase PF|00096 domain
Length = 700
Score = 54.7 bits (130), Expect = 6e-07
Identities = 24/53 (45%), Positives = 33/53 (61%)
Frame = +3
Query: 309 CNSRCGGVWIAYPFGMGDPKCYADEWFEIECRNTSRQGSKP*LKWINLEITNI 467
CN CGG+ I +PFG+G +CY + W+E+ C T+ S P L IN E+ NI
Sbjct: 33 CNRVCGGISIPFPFGIGGKECYLNPWYEVVCNTTT---SVPFLSRINRELVNI 82
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,421,772
Number of Sequences: 1393205
Number of extensions: 8625766
Number of successful extensions: 19503
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 18999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19484
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
