Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004765A_C01 KMC004765A_c01
(778 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67247.1| putative aminotransferase [Arabidopsis thaliana] 105 1e-21
ref|NP_177890.1| putative aminotransferase; protein id: At1g7767... 105 1e-21
gb|AAL67016.1| putative aminotransferase [Arabidopsis thaliana] 102 6e-21
gb|ZP_00018479.1| hypothetical protein [Chloroflexus aurantiacus] 58 1e-07
gb|ZP_00106867.1| hypothetical protein [Nostoc punctiforme] 56 5e-07
>gb|AAM67247.1| putative aminotransferase [Arabidopsis thaliana]
Length = 404
Score = 105 bits (261), Expect = 1e-21
Identities = 47/58 (81%), Positives = 55/58 (94%)
Frame = -1
Query: 778 NDVAFCEYLIKEVGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLKAAVQRMKEKLRK 605
NDVAFCEYLI+EVGV AIP+SVFYLNPEEGKNLVRF FCKDEETL+ A++RMK+KL++
Sbjct: 341 NDVAFCEYLIEEVGVVAIPTSVFYLNPEEGKNLVRFAFCKDEETLRGAIERMKQKLKR 398
>ref|NP_177890.1| putative aminotransferase; protein id: At1g77670.1, supported by
cDNA: 35179., supported by cDNA: gi_18377732
[Arabidopsis thaliana] gi|25315625|pir||D96806 probable
aminotransferase, 101422-99564 [imported] - Arabidopsis
thaliana gi|12323388|gb|AAG51669.1|AC010704_13 putative
aminotransferase; 101422-99564 [Arabidopsis thaliana]
Length = 440
Score = 105 bits (261), Expect = 1e-21
Identities = 47/58 (81%), Positives = 55/58 (94%)
Frame = -1
Query: 778 NDVAFCEYLIKEVGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLKAAVQRMKEKLRK 605
NDVAFCEYLI+EVGV AIP+SVFYLNPEEGKNLVRF FCKDEETL+ A++RMK+KL++
Sbjct: 381 NDVAFCEYLIEEVGVVAIPTSVFYLNPEEGKNLVRFAFCKDEETLRGAIERMKQKLKR 438
>gb|AAL67016.1| putative aminotransferase [Arabidopsis thaliana]
Length = 440
Score = 102 bits (254), Expect = 6e-21
Identities = 46/58 (79%), Positives = 54/58 (92%)
Frame = -1
Query: 778 NDVAFCEYLIKEVGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLKAAVQRMKEKLRK 605
NDVAFCEYLI+EVGV AIP+SVFYLNP EGKNLVRF FCKDEETL+ A++RMK+KL++
Sbjct: 381 NDVAFCEYLIEEVGVVAIPTSVFYLNPGEGKNLVRFAFCKDEETLRGAIERMKQKLKR 438
>gb|ZP_00018479.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 422
Score = 58.2 bits (139), Expect = 1e-07
Identities = 29/52 (55%), Positives = 34/52 (64%)
Frame = -1
Query: 778 NDVAFCEYLIKEVGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLKAAVQRM 623
+DV FC YL +EVGVAAIP S FY + L RF F K ETL+AA QR+
Sbjct: 364 DDVTFCRYLTQEVGVAAIPPSAFYARQHDLPLLARFCFAKRPETLRAAQQRL 415
>gb|ZP_00106867.1| hypothetical protein [Nostoc punctiforme]
Length = 286
Score = 56.2 bits (134), Expect = 5e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -1
Query: 775 DVAFCEYLIKEVGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLKAAVQRM 623
D+ F +LIK +GVA +P S F+ PE+G +L+RF F K ETL+AA R+
Sbjct: 231 DIEFTYHLIKNIGVAVVPGSSFFSQPEKGHSLIRFCFSKTPETLQAASDRL 281
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 658,922,739
Number of Sequences: 1393205
Number of extensions: 14713112
Number of successful extensions: 30921
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 29203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30884
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38375267554
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
