Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004711A_C01 KMC004711A_c01
(875 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181130.2| unknown protein; protein id: At2g35860.1, suppo... 271 7e-72
ref|NP_190805.1| unknown protein; protein id: At3g52370.1 [Arabi... 268 8e-71
ref|NP_566398.1| expressed protein; protein id: At3g11700.1, sup... 259 4e-68
pir||H84773 hypothetical protein At2g35860 [imported] - Arabidop... 257 2e-67
pir||T08462 hypothetical protein F22O6.250 - Arabidopsis thaliana 251 1e-65
>ref|NP_181130.2| unknown protein; protein id: At2g35860.1, supported by cDNA:
gi_20260579 [Arabidopsis thaliana]
gi|20260580|gb|AAM13188.1| unknown protein [Arabidopsis
thaliana]
Length = 445
Score = 271 bits (694), Expect = 7e-72
Identities = 135/166 (81%), Positives = 147/166 (88%)
Frame = -2
Query: 874 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEE 695
VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEE
Sbjct: 278 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEE 337
Query: 694 SMYNAVRRFGKVRYDTLRLPHKVVAQESDGSVKFGHADVSAYLFDPDIYTDGRISVQGID 515
SMYNAVRRFGKV+YD+LR PHKV+AQE+DGSVKFGH D SAYLFDPDIYTDGRISVQGID
Sbjct: 338 SMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGID 397
Query: 514 GVLLPPEENDGDTPRTRTRTTTPLVKVAAKPRRGKLLELACNMVGA 377
GVL P EE TP T + P+VK +K RRGKL+E+AC M+G+
Sbjct: 398 GVLFPKEE----TPATEIKPAAPVVKKVSKSRRGKLMEVACRMMGS 439
>ref|NP_190805.1| unknown protein; protein id: At3g52370.1 [Arabidopsis thaliana]
gi|11358235|pir||T46107 hypothetical protein T25B15.140
- Arabidopsis thaliana gi|10045570|emb|CAC07928.1|
putative protein [Arabidopsis thaliana]
gi|26450296|dbj|BAC42264.1| GPI-anchored protein
[Arabidopsis thaliana]
Length = 436
Score = 268 bits (685), Expect = 8e-71
Identities = 136/171 (79%), Positives = 148/171 (86%)
Frame = -2
Query: 874 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEE 695
VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEE
Sbjct: 270 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEE 329
Query: 694 SMYNAVRRFGKVRYDTLRLPHKVVAQESDGSVKFGHADVSAYLFDPDIYTDGRISVQGID 515
SMYN+VRRFGK+RYD+LR PHKV AQE+DGSVKFGH D SAYLFDPDIYTDGRISVQGID
Sbjct: 330 SMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGID 389
Query: 514 GVLLPPEENDGDTPRTRTRTTTPLVKVAAKPRRGKLLELACNMVGAFGRVC 362
GVL P E+ TP +T P+VK A KPRRGKL+E+AC M+G+ C
Sbjct: 390 GVLFPEEK----TP-VEKKTGVPVVKKAPKPRRGKLMEVACTMLGSQFPTC 435
>ref|NP_566398.1| expressed protein; protein id: At3g11700.1, supported by cDNA:
gi_15810316, supported by cDNA: gi_16604518 [Arabidopsis
thaliana] gi|15810317|gb|AAL07046.1| unknown protein
[Arabidopsis thaliana] gi|16604519|gb|AAL24265.1|
AT3g11700/T19F11_10 [Arabidopsis thaliana]
gi|22136768|gb|AAM91728.1| unknown protein [Arabidopsis
thaliana]
Length = 462
Score = 259 bits (662), Expect = 4e-68
Identities = 132/169 (78%), Positives = 147/169 (86%)
Frame = -2
Query: 874 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEE 695
VNLTSLATEMGRLVSEGYVLTVLAPNDEAM KLTTDQLSEPGAPEQI+YYHIIPEYQTEE
Sbjct: 292 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAPEQIMYYHIIPEYQTEE 351
Query: 694 SMYNAVRRFGKVRYDTLRLPHKVVAQESDGSVKFGHADVSAYLFDPDIYTDGRISVQGID 515
SMYN+VRRFGKV+Y+TLR PHKV A+E+DGSVKFG D SAYLFDPDIYTDGRISVQGID
Sbjct: 352 SMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPDIYTDGRISVQGID 411
Query: 514 GVLLPPEENDGDTPRTRTRTTTPLVKVAAKPRRGKLLELACNMVGAFGR 368
GVL P E+ + T + T P+ KV +PRRGKLLE+AC+M+GA G+
Sbjct: 412 GVLFPEEKEE----ETVKKPTGPVKKV-VQPRRGKLLEVACSMLGAIGK 455
>pir||H84773 hypothetical protein At2g35860 [imported] - Arabidopsis thaliana
gi|4510383|gb|AAD21471.1| unknown protein [Arabidopsis
thaliana]
Length = 475
Score = 257 bits (656), Expect = 2e-67
Identities = 129/155 (83%), Positives = 137/155 (88%)
Frame = -2
Query: 874 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEE 695
VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEE
Sbjct: 278 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEE 337
Query: 694 SMYNAVRRFGKVRYDTLRLPHKVVAQESDGSVKFGHADVSAYLFDPDIYTDGRISVQGID 515
SMYNAVRRFGKV+YD+LR PHKV+AQE+DGSVKFGH D SAYLFDPDIYTDGRISVQGID
Sbjct: 338 SMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGID 397
Query: 514 GVLLPPEENDGDTPRTRTRTTTPLVKVAAKPRRGK 410
GVL P EE TP T + P+VK +K RRGK
Sbjct: 398 GVLFPKEE----TPATEIKPAAPVVKKVSKSRRGK 428
>pir||T08462 hypothetical protein F22O6.250 - Arabidopsis thaliana
Length = 321
Score = 251 bits (641), Expect = 1e-65
Identities = 128/154 (83%), Positives = 136/154 (88%)
Frame = -2
Query: 874 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEE 695
VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEE
Sbjct: 166 VNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEE 225
Query: 694 SMYNAVRRFGKVRYDTLRLPHKVVAQESDGSVKFGHADVSAYLFDPDIYTDGRISVQGID 515
SMYN+VRRFGK+RYD+LR PHKV AQE+DGSVKFGH D SAYLFDPDIYTDGRISVQGID
Sbjct: 226 SMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGID 285
Query: 514 GVLLPPEENDGDTPRTRTRTTTPLVKVAAKPRRG 413
GVL P E+ TP +T P+VK A KPRRG
Sbjct: 286 GVLFPEEK----TP-VEKKTGVPVVKKAPKPRRG 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 765,039,739
Number of Sequences: 1393205
Number of extensions: 17912329
Number of successful extensions: 59398
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 54670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59144
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 47103382053
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
