Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004705A_C01 KMC004705A_c01
(704 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680735.1| unknown protein; protein id: At4g21705.1 [Arabi... 163 2e-39
gb|AAM93669.1| putative leaf protein [Oryza sativa (japonica cul... 113 3e-24
gb|AAM93671.1| putative leaf protein [Oryza sativa (japonica cul... 108 7e-23
ref|NP_198098.1| putative protein; protein id: At5g27460.1 [Arab... 104 1e-21
gb|AAM93695.1| putative leaf protein [Oryza sativa (japonica cul... 102 4e-21
>ref|NP_680735.1| unknown protein; protein id: At4g21705.1 [Arabidopsis thaliana]
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis
thaliana] gi|28827500|gb|AAO50594.1| unknown protein
[Arabidopsis thaliana]
Length = 492
Score = 163 bits (412), Expect = 2e-39
Identities = 79/170 (46%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Frame = -3
Query: 702 EAEKLLGEWELSGNTYDFRVPNILLIGYSKKGLIEKAETMLRSMVEKGKTPNPYSWSIVA 523
EAE++L EW+ SGN YDFRVPN ++ GY K + EKAE ML + +GK P SW +VA
Sbjct: 320 EAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVA 379
Query: 522 SGYVAKENMEKAFQCLKEALAVLAENKGWRPKPNVVSSILSWVTDNRDIEEVEDFVNSLK 343
+ Y K +E AF+C+K AL V ++ WRP +V+S+LSWV D ++EVE FV SL+
Sbjct: 380 TAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLR 439
Query: 342 KVMSMNRDMYRSLIKLHVR-CGKEVDGVLESMKADNIELDEELEEILKSR 196
+ +N+ MY +L+K +R G+ +D +L+ MK D IE+DEE IL +R
Sbjct: 440 NCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTR 489
>gb|AAM93669.1| putative leaf protein [Oryza sativa (japonica cultivar-group)]
Length = 545
Score = 113 bits (282), Expect = 3e-24
Identities = 61/165 (36%), Positives = 95/165 (56%)
Frame = -3
Query: 699 AEKLLGEWELSGNTYDFRVPNILLIGYSKKGLIEKAETMLRSMVEKGKTPNPYSWSIVAS 520
AEK EWE +D R+ N+LL Y K+GL+EKAE ++ V+KG+TP +W +A
Sbjct: 378 AEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAG 437
Query: 519 GYVAKENMEKAFQCLKEALAVLAENKGWRPKPNVVSSILSWVTDNRDIEEVEDFVNSLKK 340
GY KA K+ALA + + W P V L++ + +++E E+ + L++
Sbjct: 438 GYFKVGQASKAADLTKKALA--SGSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQR 495
Query: 339 VMSMNRDMYRSLIKLHVRCGKEVDGVLESMKADNIELDEELEEIL 205
+++ RD+Y L+K +V GK V +L+ MK D +E DEE E+IL
Sbjct: 496 LITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKIL 540
>gb|AAM93671.1| putative leaf protein [Oryza sativa (japonica cultivar-group)]
Length = 513
Score = 108 bits (270), Expect = 7e-23
Identities = 57/165 (34%), Positives = 95/165 (57%)
Frame = -3
Query: 699 AEKLLGEWELSGNTYDFRVPNILLIGYSKKGLIEKAETMLRSMVEKGKTPNPYSWSIVAS 520
AEK EWE +D R+ NILL Y K+GL+EKAE ++ ++KG+T +W +A
Sbjct: 346 AEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLAG 405
Query: 519 GYVAKENMEKAFQCLKEALAVLAENKGWRPKPNVVSSILSWVTDNRDIEEVEDFVNSLKK 340
GY + KA K+ALA + + W+P V +++ + +++E E+ + L++
Sbjct: 406 GYFKVGQVSKAADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQR 463
Query: 339 VMSMNRDMYRSLIKLHVRCGKEVDGVLESMKADNIELDEELEEIL 205
++ + RD+Y L+K +V G+ +L+ MK D IE DEE ++IL
Sbjct: 464 LVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>ref|NP_198098.1| putative protein; protein id: At5g27460.1 [Arabidopsis thaliana]
Length = 491
Score = 104 bits (259), Expect = 1e-21
Identities = 55/156 (35%), Positives = 83/156 (52%)
Frame = -3
Query: 702 EAEKLLGEWELSGNTYDFRVPNILLIGYSKKGLIEKAETMLRSMVEKGKTPNPYSWSIVA 523
EAE++ EWE YD RV N+LL Y + G I KAE++ ++E+G TPN +W I+
Sbjct: 337 EAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILM 396
Query: 522 SGYVAKENMEKAFQCLKEALAVLAENKGWRPKPNVVSSILSWVTDNRDIEEVEDFVNSLK 343
G+V ENMEKA + + VL WRP N+V +I + IEE +V L
Sbjct: 397 EGWVKCENMEKAIDAMHQVF-VLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLH 455
Query: 342 KVMSMNRDMYRSLIKLHVRCGKEVDGVLESMKADNI 235
++ + +YR L+++H + + E MK D +
Sbjct: 456 RLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>gb|AAM93695.1| putative leaf protein [Oryza sativa (japonica cultivar-group)]
Length = 372
Score = 102 bits (255), Expect = 4e-21
Identities = 56/165 (33%), Positives = 94/165 (56%)
Frame = -3
Query: 699 AEKLLGEWELSGNTYDFRVPNILLIGYSKKGLIEKAETMLRSMVEKGKTPNPYSWSIVAS 520
AEK EWE +D R+ N+L+ Y K+GL++KAE ++ ++KG+ P + +A
Sbjct: 205 AEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAG 264
Query: 519 GYVAKENMEKAFQCLKEALAVLAENKGWRPKPNVVSSILSWVTDNRDIEEVEDFVNSLKK 340
GY + KA K+ALA + + W P V L++ + +++E E+ ++ L++
Sbjct: 265 GYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQR 322
Query: 339 VMSMNRDMYRSLIKLHVRCGKEVDGVLESMKADNIELDEELEEIL 205
+++ RD+Y L+K +V GK V +L MK D +E DEE E+IL
Sbjct: 323 LVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 367
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 572,974,532
Number of Sequences: 1393205
Number of extensions: 12261505
Number of successful extensions: 36471
Number of sequences better than 10.0: 383
Number of HSP's better than 10.0 without gapping: 33962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36304
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32091529758
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
