Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004691A_C01 KMC004691A_c01
(923 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177487.1| protein kinase, putative; protein id: At1g73450... 77 5e-13
gb|AAL87322.1| unknown protein [Arabidopsis thaliana] 77 5e-13
ref|NP_177488.1| hypothetical protein; protein id: At1g73460.1 [... 77 5e-13
ref|NP_188402.1| protein kinase, putative; protein id: At3g17750... 71 2e-11
dbj|BAB02869.1| Ser-Thr protein kinase-like protein [Arabidopsis... 71 2e-11
>ref|NP_177487.1| protein kinase, putative; protein id: At1g73450.1 [Arabidopsis
thaliana] gi|25406268|pir||B96761 probable protein kinase
T9L24.36 [imported] - Arabidopsis thaliana
gi|11120796|gb|AAG30976.1|AC012396_12 protein kinase,
putative [Arabidopsis thaliana]
Length = 1155
Score = 76.6 bits (187), Expect = 5e-13
Identities = 33/38 (86%), Positives = 36/38 (93%)
Frame = -3
Query: 921 GFIDFVNHLLEVNPKKRPSASEALKHPWLSYPYEPISS 808
GF DFV HLLE+NPKKRPSA+EALKHPWLSYPYEPIS+
Sbjct: 1118 GFTDFVAHLLEINPKKRPSAAEALKHPWLSYPYEPISA 1155
>gb|AAL87322.1| unknown protein [Arabidopsis thaliana]
Length = 276
Score = 76.6 bits (187), Expect = 5e-13
Identities = 33/38 (86%), Positives = 36/38 (93%)
Frame = -3
Query: 921 GFIDFVNHLLEVNPKKRPSASEALKHPWLSYPYEPISS 808
GF DFV HLLE+NPKKRPSA+EALKHPWLSYPYEPIS+
Sbjct: 239 GFTDFVAHLLEINPKKRPSAAEALKHPWLSYPYEPISA 276
>ref|NP_177488.1| hypothetical protein; protein id: At1g73460.1 [Arabidopsis thaliana]
gi|25406269|pir||C96761 hypothetical protein T9L24.35
[imported] - Arabidopsis thaliana
gi|11120792|gb|AAG30972.1|AC012396_8 hypothetical protein
[Arabidopsis thaliana]
Length = 1157
Score = 76.6 bits (187), Expect = 5e-13
Identities = 33/38 (86%), Positives = 36/38 (93%)
Frame = -3
Query: 921 GFIDFVNHLLEVNPKKRPSASEALKHPWLSYPYEPISS 808
GF DFV HLLE+NPKKRPSA+EALKHPWLSYPYEPIS+
Sbjct: 1120 GFTDFVAHLLEINPKKRPSAAEALKHPWLSYPYEPISA 1157
>ref|NP_188402.1| protein kinase, putative; protein id: At3g17750.1, supported by cDNA:
gi_19699070 [Arabidopsis thaliana]
gi|19699071|gb|AAL90903.1| AT3g17750/MIG5_4 [Arabidopsis
thaliana] gi|27764950|gb|AAO23596.1| At3g17750/MIG5_4
[Arabidopsis thaliana]
Length = 1138
Score = 71.2 bits (173), Expect = 2e-11
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = -3
Query: 921 GFIDFVNHLLEVNPKKRPSASEALKHPWLSYPYEPISS 808
GFIDFV +LL+V+PKKRPSA EALKHPWL+YPYEPIS+
Sbjct: 1101 GFIDFVAYLLQVDPKKRPSAFEALKHPWLTYPYEPISA 1138
>dbj|BAB02869.1| Ser-Thr protein kinase-like protein [Arabidopsis thaliana]
Length = 1266
Score = 71.2 bits (173), Expect = 2e-11
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = -3
Query: 921 GFIDFVNHLLEVNPKKRPSASEALKHPWLSYPYEPISS 808
GFIDFV +LL+V+PKKRPSA EALKHPWL+YPYEPIS+
Sbjct: 1229 GFIDFVAYLLQVDPKKRPSAFEALKHPWLTYPYEPISA 1266
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 781,358,713
Number of Sequences: 1393205
Number of extensions: 17309869
Number of successful extensions: 42816
Number of sequences better than 10.0: 722
Number of HSP's better than 10.0 without gapping: 40523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42776
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 51027805888
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
