Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004685A_C01 KMC004685A_c01
(468 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T04916 hypothetical protein T10I14.180 - Arabidopsis thalia... 105 2e-22
ref|NP_193966.2| putative protein; protein id: At4g22350.1, supp... 105 2e-22
ref|NP_193960.1| putative protein; protein id: At4g22290.1 [Arab... 104 5e-22
gb|AAN31917.1| unknown protein [Arabidopsis thaliana] 104 5e-22
gb|EAA12281.1| ebiP6644 [Anopheles gambiae str. PEST] 80 1e-14
>pir||T04916 hypothetical protein T10I14.180 - Arabidopsis thaliana
gi|2832685|emb|CAA16785.1| putative protein [Arabidopsis
thaliana] gi|7269081|emb|CAB79190.1| putative protein
[Arabidopsis thaliana]
Length = 477
Score = 105 bits (262), Expect = 2e-22
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1
Query: 465 SRYDLIAHLVHDGKPGEGLYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 286
S+Y+LIA++VHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V LSE YMQIYEQ
Sbjct: 415 SKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 474
Query: 285 QQ 280
Q+
Sbjct: 475 QE 476
>ref|NP_193966.2| putative protein; protein id: At4g22350.1, supported by cDNA:
gi_18087624 [Arabidopsis thaliana]
gi|18087625|gb|AAL58942.1|AF462856_1 AT4g22410/F7K2_7
[Arabidopsis thaliana]
Length = 510
Score = 105 bits (262), Expect = 2e-22
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1
Query: 465 SRYDLIAHLVHDGKPGEGLYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 286
S+Y+LIA++VHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V LSE YMQIYEQ
Sbjct: 448 SKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 507
Query: 285 QQ 280
Q+
Sbjct: 508 QE 509
>ref|NP_193960.1| putative protein; protein id: At4g22290.1 [Arabidopsis thaliana]
gi|7486824|pir||T04910 hypothetical protein T10I14.120 -
Arabidopsis thaliana gi|2832679|emb|CAA16779.1| putative
protein [Arabidopsis thaliana] gi|7269075|emb|CAB79184.1|
putative protein [Arabidopsis thaliana]
Length = 974
Score = 104 bits (259), Expect = 5e-22
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = -1
Query: 465 SRYDLIAHLVHDGKPGEGLYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 286
S+Y+LIA++VHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V LSE YMQIYEQ
Sbjct: 912 SKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 971
Query: 285 QQ 280
++
Sbjct: 972 EE 973
>gb|AAN31917.1| unknown protein [Arabidopsis thaliana]
Length = 541
Score = 104 bits (259), Expect = 5e-22
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = -1
Query: 465 SRYDLIAHLVHDGKPGEGLYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 286
S+Y+LIA++VHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V LSE YMQIYEQ
Sbjct: 479 SKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 538
Query: 285 QQ 280
++
Sbjct: 539 EE 540
>gb|EAA12281.1| ebiP6644 [Anopheles gambiae str. PEST]
Length = 414
Score = 79.7 bits (195), Expect = 1e-14
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = -1
Query: 465 SRYDLIAHLVHDGKPGEGLYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 286
++Y+L+A++VHDG+P G YR + +KS WYEMQDLHV+ LP ++ L+E Y+QIYE
Sbjct: 353 TKYNLVANIVHDGEPNSGTYRCHILQKSTNQWYEMQDLHVTNILPQMITLTEAYIQIYEL 412
Query: 285 QQ 280
Q+
Sbjct: 413 QE 414
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370,371,184
Number of Sequences: 1393205
Number of extensions: 7117610
Number of successful extensions: 20043
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 19572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20041
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
