Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004665A_C01 KMC004665A_c01
(404 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA55484.1| ABI1 [Arabidopsis thaliana] 101 2e-21
gb|AAK59578.1| putative protein phosphatase ABI1 [Arabidopsis th... 101 2e-21
ref|NP_194338.1| protein phosphatase ABI1; protein id: At4g26080... 101 2e-21
ref|NP_200515.1| protein phosphatase 2C, ABI2; protein id: At5g5... 100 7e-21
dbj|BAC05575.1| protein phosphatase 2C-like protein [Oryza sativ... 99 1e-20
>emb|CAA55484.1| ABI1 [Arabidopsis thaliana]
Length = 434
Score = 101 bits (252), Expect = 2e-21
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Frame = -1
Query: 404 VMTNEEACDVARKRILLWHKKYGNNGTTT-----GQGEGVDPAAQSAAEYLSKLALHRGS 240
VMT+EEAC++ARKRILLWHKK G + + EG DPAA SAAEYLSKLA+ RGS
Sbjct: 352 VMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGS 411
Query: 239 DDNISIIVIDLKPQRKLKRKA*N 171
DNIS++V+DLKP+RKLK K N
Sbjct: 412 KDNISVVVVDLKPRRKLKSKPLN 434
>gb|AAK59578.1| putative protein phosphatase ABI1 [Arabidopsis thaliana]
Length = 434
Score = 101 bits (252), Expect = 2e-21
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Frame = -1
Query: 404 VMTNEEACDVARKRILLWHKKYGNNGTTT-----GQGEGVDPAAQSAAEYLSKLALHRGS 240
VMT+EEAC++ARKRILLWHKK G + + EG DPAA SAAEYLSKLA+ RGS
Sbjct: 352 VMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGS 411
Query: 239 DDNISIIVIDLKPQRKLKRKA*N 171
DNIS++V+DLKP+RKLK K N
Sbjct: 412 KDNISVVVVDLKPRRKLKSKPLN 434
>ref|NP_194338.1| protein phosphatase ABI1; protein id: At4g26080.1, supported by
cDNA: gi_14334799, supported by cDNA: gi_549980
[Arabidopsis thaliana] gi|21431817|sp|P49597|P2C1_ARATH
Protein phosphatase 2C ABI1 (PP2C) (Abscisic
acid-insensitive 1) gi|7488009|pir||T04263
phosphoprotein phosphatase (EC 3.1.3.16) ABI1 -
Arabidopsis thaliana gi|499301|emb|CAA54383.1| ABI1
[Arabidopsis thaliana] gi|549981|gb|AAA50237.1| abscisic
acid insensitive protein gi|4538937|emb|CAB39673.1|
protein phosphatase ABI1 [Arabidopsis thaliana]
gi|7269459|emb|CAB79463.1| protein phosphatase ABI1
[Arabidopsis thaliana] gi|23297060|gb|AAN13081.1|
phosphatase ABI1 [Arabidopsis thaliana]
Length = 434
Score = 101 bits (252), Expect = 2e-21
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Frame = -1
Query: 404 VMTNEEACDVARKRILLWHKKYGNNGTTT-----GQGEGVDPAAQSAAEYLSKLALHRGS 240
VMT+EEAC++ARKRILLWHKK G + + EG DPAA SAAEYLSKLA+ RGS
Sbjct: 352 VMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGS 411
Query: 239 DDNISIIVIDLKPQRKLKRKA*N 171
DNIS++V+DLKP+RKLK K N
Sbjct: 412 KDNISVVVVDLKPRRKLKSKPLN 434
>ref|NP_200515.1| protein phosphatase 2C, ABI2; protein id: At5g57050.1 [Arabidopsis
thaliana] gi|3914239|sp|O04719|P2C2_ARATH Protein
phosphatase 2C ABI2 (PP2C) (Abscisic acid-insensitive 2)
gi|1945140|emb|CAA70163.1| ABI2 protein phosphatase 2C
[Arabidopsis thaliana] gi|1945142|emb|CAA70162.1| ABI2
protein phosphatase 2C [Arabidopsis thaliana]
gi|2564213|emb|CAA72538.1| ABI2 [Arabidopsis thaliana]
gi|8777445|dbj|BAA97035.1| protein phosphatase 2C ABI2
(PP2C) [Arabidopsis thaliana] gi|22531154|gb|AAM97081.1|
protein phosphatase 2C ABI2 [Arabidopsis thaliana]
Length = 423
Score = 99.8 bits (247), Expect = 7e-21
Identities = 52/82 (63%), Positives = 60/82 (72%), Gaps = 4/82 (4%)
Frame = -1
Query: 404 VMTNEEACDVARKRILLWHKKYGNNGTTT----GQGEGVDPAAQSAAEYLSKLALHRGSD 237
VMTNEE CD+ARKRILLWHKK G +GEG DPAA SAAEYLSK+AL +GS
Sbjct: 342 VMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSK 401
Query: 236 DNISIIVIDLKPQRKLKRKA*N 171
DNIS++V+DLK RK K K+ N
Sbjct: 402 DNISVVVVDLKGIRKFKSKSLN 423
>dbj|BAC05575.1| protein phosphatase 2C-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 467
Score = 99.4 bits (246), Expect = 1e-20
Identities = 50/77 (64%), Positives = 60/77 (76%), Gaps = 1/77 (1%)
Frame = -1
Query: 404 VMTNEEACDVARKRILLWHKKYGNNGTTTGQ-GEGVDPAAQSAAEYLSKLALHRGSDDNI 228
VM+NEE CDVARKRILLWHKK G N + + G+ DPAA++AAE LSKLAL +GS DNI
Sbjct: 391 VMSNEEVCDVARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQKGSKDNI 450
Query: 227 SIIVIDLKPQRKLKRKA 177
S+IV+DLK RK K K+
Sbjct: 451 SVIVVDLKAHRKFKSKS 467
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,390,855
Number of Sequences: 1393205
Number of extensions: 5746863
Number of successful extensions: 14656
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 14288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14613
length of database: 448,689,247
effective HSP length: 110
effective length of database: 295,436,697
effective search space used: 7090480728
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
