Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004620A_C01 KMC004620A_c01
(562 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173910.1| wall-associated kinase, putative; protein id: A... 86 2e-16
ref|NP_198637.2| protein kinase - like protein; protein id: At5g... 71 1e-11
dbj|BAB11288.1| contains similarity to protein kinase~gene_id:MX... 71 1e-11
pir||A86318 protein F15H18.11 [imported] - Arabidopsis thaliana ... 69 3e-11
ref|NP_173275.1| wall-associated kinase, putative; protein id: A... 69 3e-11
>ref|NP_173910.1| wall-associated kinase, putative; protein id: At1g25390.1,
supported by cDNA: gi_15529241 [Arabidopsis thaliana]
gi|25535949|pir||H86383 probable wall-associated kinase
[imported] - Arabidopsis thaliana
gi|12321510|gb|AAG50813.1|AC079281_15 wall-associated
kinase, putative [Arabidopsis thaliana]
Length = 629
Score = 86.3 bits (212), Expect = 2e-16
Identities = 43/118 (36%), Positives = 72/118 (60%)
Frame = -1
Query: 544 DLVDPFIGFDSDNEVKGMIVSMALLAFQCLQMDKELRPSMQEVLDELRRIESVKDEIELV 365
+L+D +G+ ++ V+ M +A LAFQCLQ D +RP+M++V+ EL+ I++ + +
Sbjct: 518 ELIDQNLGYATNEGVRKMTTMVAELAFQCLQQDNTMRPTMEQVVHELKGIQNEEQKCPTY 577
Query: 364 EEADVHGVGVAQSNVHPPPPASPEWDDIGLLKHVKQPSSPNTVTDKWESKCTTPNISS 191
+ + + P P+ P+W + LLK++K P SP +VTD+W SK TTPN S+
Sbjct: 578 DYREETII---------PHPSPPDWGEAALLKNMKFPRSPVSVTDQWTSKSTTPNTSA 626
>ref|NP_198637.2| protein kinase - like protein; protein id: At5g38210.1, supported
by cDNA: gi_18175790 [Arabidopsis thaliana]
gi|18175791|gb|AAL59928.1| putative protein kinase
[Arabidopsis thaliana] gi|22136902|gb|AAM91795.1|
putative protein kinase [Arabidopsis thaliana]
Length = 686
Score = 70.9 bits (172), Expect = 1e-11
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Frame = -1
Query: 562 QESEIGDLVDPFIGFDSDNEVKGMIVSMALLAFQCLQMDKELRPSMQEVLDELRRI--ES 389
Q + +L D +GF D VK M+ S+A LAF+CLQ ++++RPSM E+++ LR I +
Sbjct: 578 QNDAVHELADLSLGFARDPSVKKMMSSVAELAFRCLQQERDVRPSMDEIVEVLRVIQKDG 637
Query: 388 VKDEIELVEEADVHG---VGVAQSNVHPPPPASPEWD 287
+ D ++V E DV+G VG+ + V PPP SPE D
Sbjct: 638 ISDSKDVVVEIDVNGGDDVGLLKHGV--PPPLSPETD 672
>dbj|BAB11288.1| contains similarity to protein kinase~gene_id:MXA21.10 [Arabidopsis
thaliana]
Length = 978
Score = 70.9 bits (172), Expect = 1e-11
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Frame = -1
Query: 562 QESEIGDLVDPFIGFDSDNEVKGMIVSMALLAFQCLQMDKELRPSMQEVLDELRRI--ES 389
Q + +L D +GF D VK M+ S+A LAF+CLQ ++++RPSM E+++ LR I +
Sbjct: 870 QNDAVHELADLSLGFARDPSVKKMMSSVAELAFRCLQQERDVRPSMDEIVEVLRVIQKDG 929
Query: 388 VKDEIELVEEADVHG---VGVAQSNVHPPPPASPEWD 287
+ D ++V E DV+G VG+ + V PPP SPE D
Sbjct: 930 ISDSKDVVVEIDVNGGDDVGLLKHGV--PPPLSPETD 964
>pir||A86318 protein F15H18.11 [imported] - Arabidopsis thaliana
gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11
[Arabidopsis thaliana]
Length = 1154
Score = 69.3 bits (168), Expect = 3e-11
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = -1
Query: 562 QESEIGDLVDPFIGFDSDNEVKGMIVSMALLAFQCLQMDKELRPSMQEVLDELRRIESVK 383
Q E+ D+VDP +GFD+D V+ ++++A LAFQCLQ DK+LRP M V D L RI++
Sbjct: 783 QNHELRDMVDPSLGFDTDTRVRQTVIAVAELAFQCLQSDKDLRPCMSHVQDTLTRIQNNG 842
Query: 382 DEIEL-VEEADVHGVGVAQSNVHPPPPASPEWD 287
E+ V + + G VAQS P +WD
Sbjct: 843 FGSEMDVVDVNKSGPLVAQS----PDSVIVKWD 871
>ref|NP_173275.1| wall-associated kinase, putative; protein id: At1g18390.1
[Arabidopsis thaliana]
Length = 605
Score = 69.3 bits (168), Expect = 3e-11
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = -1
Query: 562 QESEIGDLVDPFIGFDSDNEVKGMIVSMALLAFQCLQMDKELRPSMQEVLDELRRIESVK 383
Q E+ D+VDP +GFD+D V+ ++++A LAFQCLQ DK+LRP M V D L RI++
Sbjct: 515 QNHELRDMVDPSLGFDTDTRVRQTVIAVAELAFQCLQSDKDLRPCMSHVQDTLTRIQNNG 574
Query: 382 DEIEL-VEEADVHGVGVAQSNVHPPPPASPEWD 287
E+ V + + G VAQS P +WD
Sbjct: 575 FGSEMDVVDVNKSGPLVAQS----PDSVIVKWD 603
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,033,431
Number of Sequences: 1393205
Number of extensions: 9536887
Number of successful extensions: 38663
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 36349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38565
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
