Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004614A_C01 KMC004614A_c01
(599 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF64041.1|AF229811_1 fatty acid hydroperoxide lyase [Cucumis... 158 8e-39
gb|AAK54282.1|AF081955_1 fatty acid 9-hydroperoxide lyase [Cucum... 155 3e-38
gb|AAL86702.1|AF461042_1 cytochrome P450 CYP74C4 [Lycopersicon e... 150 6e-36
gb|AAN76867.1|AF454634_1 cytochrome P450 CYP74C3 [Lycopersicon e... 149 3e-35
gb|AAN37417.1| allene oxide synthase [Solanum tuberosum] 144 4e-35
>gb|AAF64041.1|AF229811_1 fatty acid hydroperoxide lyase [Cucumis sativus]
Length = 478
Score = 158 bits (399), Expect(2) = 8e-39
Identities = 76/110 (69%), Positives = 89/110 (80%), Gaps = 1/110 (0%)
Frame = -1
Query: 572 RKGRLIFGYQPFATKDPKVFENPEEFVGHRFVGE-GEKLLKYVYWSNGRETEEPTVDNKQ 396
+KG IFGYQPFATKDPK+F++ E+FVG RFVGE GEKLLKYVYWSN RET EPT +NKQ
Sbjct: 369 KKGETIFGYQPFATKDPKIFKDSEKFVGDRFVGEEGEKLLKYVYWSNERETVEPTAENKQ 428
Query: 395 CPAKNLVVLMCRLYVVEFFFRYDTFTFEFKPVVLGPNVTIESLTKATTTV 246
CP KNLVV+M R+ VVEFF RYDTFT + + LGP V +SLT+AT +V
Sbjct: 429 CPGKNLVVMMGRIIVVEFFLRYDTFTVDVADLALGPAVKFKSLTRATASV 478
Score = 24.3 bits (51), Expect(2) = 8e-39
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -3
Query: 597 SHDPAFEIKKGEIDF 553
SHD F+IKKGE F
Sbjct: 361 SHDSCFKIKKGETIF 375
>gb|AAK54282.1|AF081955_1 fatty acid 9-hydroperoxide lyase [Cucumis melo]
Length = 481
Score = 155 bits (393), Expect(2) = 3e-38
Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 1/110 (0%)
Frame = -1
Query: 572 RKGRLIFGYQPFATKDPKVFENPEEFVGHRFVGE-GEKLLKYVYWSNGRETEEPTVDNKQ 396
+KG IFGYQPFATKDPK+F++ E+FVG RFVGE GEKLLKYVYWSN RET EPT +NKQ
Sbjct: 372 KKGETIFGYQPFATKDPKIFKDSEKFVGDRFVGEEGEKLLKYVYWSNERETVEPTPENKQ 431
Query: 395 CPAKNLVVLMCRLYVVEFFFRYDTFTFEFKPVVLGPNVTIESLTKATTTV 246
CP KNLVVL+ R+ VVEFF RYDTFT E + LGP V +SLT+AT V
Sbjct: 432 CPGKNLVVLIGRIMVVEFFLRYDTFTVEVADLPLGPAVKFKSLTRATDMV 481
Score = 24.6 bits (52), Expect(2) = 3e-38
Identities = 10/15 (66%), Positives = 12/15 (79%)
Frame = -3
Query: 597 SHDPAFEIKKGEIDF 553
SHD +F+IKKGE F
Sbjct: 364 SHDSSFKIKKGETIF 378
>gb|AAL86702.1|AF461042_1 cytochrome P450 CYP74C4 [Lycopersicon esculentum]
Length = 494
Score = 150 bits (378), Expect(2) = 6e-36
Identities = 69/105 (65%), Positives = 83/105 (78%), Gaps = 1/105 (0%)
Frame = -1
Query: 572 RKGRLIFGYQPFATKDPKVFENPEEFVGHRFVG-EGEKLLKYVYWSNGRETEEPTVDNKQ 396
+KG +IFGYQ FATKD K+FENPEEF+ RF+G EGEKLLKYVYWSN RET+ PTVDNKQ
Sbjct: 387 KKGEMIFGYQTFATKDAKIFENPEEFIAERFMGSEGEKLLKYVYWSNARETDSPTVDNKQ 446
Query: 395 CPAKNLVVLMCRLYVVEFFFRYDTFTFEFKPVVLGPNVTIESLTK 261
C ++L VL+CRL +VEFF RYDTFT E + GP +T ++L K
Sbjct: 447 CAGRDLAVLLCRLLLVEFFMRYDTFTVESSKYLAGPLITFKTLEK 491
Score = 22.7 bits (47), Expect(2) = 6e-36
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -3
Query: 597 SHDPAFEIKKGEIDF 553
SHD F IKKGE+ F
Sbjct: 379 SHDSNFLIKKGEMIF 393
>gb|AAN76867.1|AF454634_1 cytochrome P450 CYP74C3 [Lycopersicon esculentum]
Length = 491
Score = 149 bits (376), Expect = 3e-35
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = -1
Query: 572 RKGRLIFGYQPFATKDPKVFENPEEFVGHRFVGEGEKLLKYVYWSNGRETEEPTVDNKQC 393
+K LIFGYQP ATKD KVF+N EEF RFVG GEKLLKYVYWSNG+E + P+V++KQC
Sbjct: 385 KKDELIFGYQPLATKDSKVFKNAEEFNPDRFVGGGEKLLKYVYWSNGKEIDNPSVNDKQC 444
Query: 392 PAKNLVVLMCRLYVVEFFFRYDTFTFEFKPVVLGPNVTIESLTKATT 252
P K+L+VLM RL VVEFF RYDTF EF ++LG VT +SLTKAT+
Sbjct: 445 PGKDLIVLMGRLLVVEFFMRYDTFEVEFGKLLLGSKVTFKSLTKATS 491
>gb|AAN37417.1| allene oxide synthase [Solanum tuberosum]
Length = 507
Score = 144 bits (363), Expect(2) = 4e-35
Identities = 68/106 (64%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = -1
Query: 572 RKGRLIFGYQPFATKDPKVFENPEEFVGHRFVGE-GEKLLKYVYWSNGRETEEPTVDNKQ 396
+KG ++FGYQPFATKDPK+F+ PEEFV RFVGE GEKLLKYV WSNG ETE PTV NKQ
Sbjct: 402 KKGEMLFGYQPFATKDPKIFDRPEEFVADRFVGEEGEKLLKYVLWSNGPETESPTVGNKQ 461
Query: 395 CPAKNLVVLMCRLYVVEFFFRYDTFTFEFKPVVLGPNVTIESLTKA 258
C ++ VV++ RL+V EFF RYDTF + LG ++TI SL KA
Sbjct: 462 CAGRDFVVMVSRLFVTEFFLRYDTFNVDVDKSALGASITITSLKKA 507
Score = 25.8 bits (55), Expect(2) = 4e-35
Identities = 10/15 (66%), Positives = 12/15 (79%)
Frame = -3
Query: 597 SHDPAFEIKKGEIDF 553
SHD FE+KKGE+ F
Sbjct: 394 SHDAVFEVKKGEMLF 408
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,947,679
Number of Sequences: 1393205
Number of extensions: 12748939
Number of successful extensions: 43443
Number of sequences better than 10.0: 248
Number of HSP's better than 10.0 without gapping: 38360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42585
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
