Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004575A_C01 KMC004575A_c01
(491 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09667 peroxidase (EC 1.11.1.7) pxdD precursor - alfalfa (f... 192 2e-48
emb|CAA09881.1| peroxidase [Trifolium repens] 177 4e-44
pir||JC4782 peroxidase (EC 1.11.1.7) 2 precursor - alfalfa gi|97... 172 2e-42
emb|CAC38106.1| peroxidase2 [Medicago sativa] 172 2e-42
ref|NP_190565.1| peroxidase, putative; protein id: At3g49960.1 [... 163 8e-40
>pir||T09667 peroxidase (EC 1.11.1.7) pxdD precursor - alfalfa (fragment)
gi|537319|gb|AAB41812.1| peroxidase [Medicago sativa]
Length = 325
Score = 192 bits (487), Expect = 2e-48
Identities = 92/111 (82%), Positives = 103/111 (91%)
Frame = -3
Query: 489 SQVDPTMNRQYATELKSQCPRNVDPRIAINMDPTTPKAFDNVYFQNLQKGKGLFTSDQVL 310
S+VDPT++ YA +LKS CPR+VDPR+A++MDP TP AFDNVYF+NLQKGKGLFTSDQVL
Sbjct: 215 SRVDPTLDLHYAAKLKSMCPRDVDPRVAVDMDPITPHAFDNVYFKNLQKGKGLFTSDQVL 274
Query: 309 FMDSRSKAAVNAFASSSKTFRANFVAAMTKLGRVGVKNAHNGNIRTDCSVI 157
F DSRSKAAVNAFASS+K FRANFVAAMTKLGRVGVKN+HNGNIRTDCSVI
Sbjct: 275 FTDSRSKAAVNAFASSNKIFRANFVAAMTKLGRVGVKNSHNGNIRTDCSVI 325
>emb|CAA09881.1| peroxidase [Trifolium repens]
Length = 329
Score = 177 bits (450), Expect = 4e-44
Identities = 81/111 (72%), Positives = 95/111 (84%)
Frame = -3
Query: 489 SQVDPTMNRQYATELKSQCPRNVDPRIAINMDPTTPKAFDNVYFQNLQKGKGLFTSDQVL 310
S VDPT+N+QYA +L+ CPRNVDPRIAINMDPTTP+ FDN Y+QNLQ+GKGLFTSDQ+L
Sbjct: 219 SPVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRQFDNAYYQNLQQGKGLFTSDQIL 278
Query: 309 FMDSRSKAAVNAFASSSKTFRANFVAAMTKLGRVGVKNAHNGNIRTDCSVI 157
F D+RS+A VN+FASS F ANF+ AMTKLGR+GVK A NG IRTDCSV+
Sbjct: 279 FTDTRSRATVNSFASSGNVFNANFINAMTKLGRIGVKTARNGKIRTDCSVL 329
>pir||JC4782 peroxidase (EC 1.11.1.7) 2 precursor - alfalfa
gi|971564|emb|CAA62228.1| peroxidase2 [Medicago sativa]
Length = 323
Score = 172 bits (435), Expect = 2e-42
Identities = 76/109 (69%), Positives = 94/109 (85%)
Frame = -3
Query: 483 VDPTMNRQYATELKSQCPRNVDPRIAINMDPTTPKAFDNVYFQNLQKGKGLFTSDQVLFM 304
VDPT+N+QYA +L+ CPRNVDPRIAINMDPTTP+ FDNVY++NLQ+GKGLFTSDQ+LF
Sbjct: 215 VDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYKNLQQGKGLFTSDQILFT 274
Query: 303 DSRSKAAVNAFASSSKTFRANFVAAMTKLGRVGVKNAHNGNIRTDCSVI 157
D+RS+ VN+FA++ F ANF+ AMTKLGR+GVK A NG IRTDC+V+
Sbjct: 275 DTRSRNTVNSFATNGNVFNANFITAMTKLGRIGVKTARNGKIRTDCTVL 323
>emb|CAC38106.1| peroxidase2 [Medicago sativa]
Length = 323
Score = 172 bits (435), Expect = 2e-42
Identities = 76/109 (69%), Positives = 94/109 (85%)
Frame = -3
Query: 483 VDPTMNRQYATELKSQCPRNVDPRIAINMDPTTPKAFDNVYFQNLQKGKGLFTSDQVLFM 304
VDPT+N+QYA +L+ CPRNVDPRIAINMDPTTP+ FDNVY++NLQ+GKGLFTSDQ+LF
Sbjct: 215 VDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYKNLQQGKGLFTSDQILFT 274
Query: 303 DSRSKAAVNAFASSSKTFRANFVAAMTKLGRVGVKNAHNGNIRTDCSVI 157
D+RS+ VN+FA++ F ANF+ AMTKLGR+GVK A NG IRTDC+V+
Sbjct: 275 DTRSRNTVNSFATNGNVFNANFITAMTKLGRIGVKTARNGKIRTDCTVL 323
>ref|NP_190565.1| peroxidase, putative; protein id: At3g49960.1 [Arabidopsis
thaliana] gi|25453201|sp|Q96510|PE35_ARATH Peroxidase 35
precursor (Atperox P35) (ATP21a) gi|11255591|pir||T45849
peroxidase ATP21a - Arabidopsis thaliana
gi|1546696|emb|CAA67339.1| peroxidase; peroxidase ATP21a
[Arabidopsis thaliana] gi|6522917|emb|CAB62104.1|
peroxidase ATP21a [Arabidopsis thaliana]
Length = 329
Score = 163 bits (413), Expect = 8e-40
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = -3
Query: 489 SQVDPTMNRQYATELKSQCPRNVDPRIAINMDPTTPKAFDNVYFQNLQKGKGLFTSDQVL 310
+ VDPT+N+ YA EL+ CP+NVDPRIAINMDP TPK FDN YF+NLQ+GKGLFTSDQVL
Sbjct: 218 NSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVL 277
Query: 309 FMDSRSKAAVNAFASSSKTFRANFVAAMTKLGRVGVKNAHNGNIRTDC 166
F D RS+ VNA+AS+S F FV AMTKLGRVGVKN+ NGNIR DC
Sbjct: 278 FTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDC 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,717,350
Number of Sequences: 1393205
Number of extensions: 10791380
Number of successful extensions: 25207
Number of sequences better than 10.0: 457
Number of HSP's better than 10.0 without gapping: 24365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24993
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
