Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004571A_C01 KMC004571A_c01
(576 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD29849.2|AF075700_1 homoglutathione synthetase GSHS2 [Medic... 209 2e-53
gb|AAK93945.1|AF194421_1 homoglutathione synthetase GSHS2 [Medic... 207 6e-53
gb|AAF98156.1|AF258319_1 putative homoglutathione synthetase [Pi... 206 2e-52
gb|AAK77663.1|AF279703_1 glutathione synthetase [Lotus japonicus] 202 3e-51
emb|CAB91078.1| homoglutathione synthetase [Glycine max] 198 5e-50
>gb|AAD29849.2|AF075700_1 homoglutathione synthetase GSHS2 [Medicago truncatula]
Length = 546
Score = 209 bits (532), Expect = 2e-53
Identities = 102/119 (85%), Positives = 110/119 (91%)
Frame = -3
Query: 571 KPELFVMKPQREGGGTNIYGDDLRETLIKLQKSGSEEDAAYILMQRIFPTSTAAILMRNG 392
KPELFVMKPQREGGG NIYGDDLRETL +LQK GS+EDAAYILMQRIFP +TA+ILMRNG
Sbjct: 428 KPELFVMKPQREGGGNNIYGDDLRETLKRLQKPGSQEDAAYILMQRIFPANTASILMRNG 487
Query: 391 CWHKDHVLTEFGIFGTYLRNKDKVIINSESGYMVRTKMSSSDEGGVLPGFGVIDSVYLT 215
HKDHV++EFGIF TYLRNKDKVI+N+ESGYMVRTK S SDEGGVLPGFGVIDSVYLT
Sbjct: 488 FLHKDHVISEFGIFSTYLRNKDKVIVNNESGYMVRTKPSLSDEGGVLPGFGVIDSVYLT 546
>gb|AAK93945.1|AF194421_1 homoglutathione synthetase GSHS2 [Medicago truncatula]
Length = 269
Score = 207 bits (528), Expect = 6e-53
Identities = 101/119 (84%), Positives = 110/119 (91%)
Frame = -3
Query: 571 KPELFVMKPQREGGGTNIYGDDLRETLIKLQKSGSEEDAAYILMQRIFPTSTAAILMRNG 392
KPELFVMKPQREGGG NIYGDDLRETL +LQK GS+EDAAYILMQRIFP +TA+ILMRNG
Sbjct: 151 KPELFVMKPQREGGGNNIYGDDLRETLKRLQKPGSQEDAAYILMQRIFPANTASILMRNG 210
Query: 391 CWHKDHVLTEFGIFGTYLRNKDKVIINSESGYMVRTKMSSSDEGGVLPGFGVIDSVYLT 215
HKDHV++EFGIF TYLRNKDKVI+N+ESGYMVRTK S SDEGGVLPGFGVIDSV+LT
Sbjct: 211 FLHKDHVISEFGIFSTYLRNKDKVIVNNESGYMVRTKPSLSDEGGVLPGFGVIDSVFLT 269
>gb|AAF98156.1|AF258319_1 putative homoglutathione synthetase [Pisum sativum]
Length = 495
Score = 206 bits (523), Expect = 2e-52
Identities = 101/120 (84%), Positives = 109/120 (90%)
Frame = -3
Query: 574 EKPELFVMKPQREGGGTNIYGDDLRETLIKLQKSGSEEDAAYILMQRIFPTSTAAILMRN 395
E PELFVMKPQREGGG NIYGDDLRETL+KLQKS S+EDAAYILMQRIFP +T AIL+RN
Sbjct: 376 ETPELFVMKPQREGGGNNIYGDDLRETLLKLQKSDSQEDAAYILMQRIFPVNTEAILVRN 435
Query: 394 GCWHKDHVLTEFGIFGTYLRNKDKVIINSESGYMVRTKMSSSDEGGVLPGFGVIDSVYLT 215
G HKD V++EFGIF TYLRNKDKVI+N+ESGYMVRTK S SDEGGVLPGFGVIDSVYLT
Sbjct: 436 GFLHKDRVISEFGIFSTYLRNKDKVIVNNESGYMVRTKPSLSDEGGVLPGFGVIDSVYLT 495
>gb|AAK77663.1|AF279703_1 glutathione synthetase [Lotus japonicus]
Length = 493
Score = 202 bits (513), Expect = 3e-51
Identities = 92/120 (76%), Positives = 111/120 (91%)
Frame = -3
Query: 574 EKPELFVMKPQREGGGTNIYGDDLRETLIKLQKSGSEEDAAYILMQRIFPTSTAAILMRN 395
EKPELFVMKPQREGGG NIYG+ +RETL+KLQ++GS+EDAAYILMQRIFPT +AA+LMRN
Sbjct: 374 EKPELFVMKPQREGGGNNIYGNAVRETLLKLQQAGSQEDAAYILMQRIFPTLSAAVLMRN 433
Query: 394 GCWHKDHVLTEFGIFGTYLRNKDKVIINSESGYMVRTKMSSSDEGGVLPGFGVIDSVYLT 215
GCWHKDH ++E GIF TYLRNKD+V++N++SGY++RTK+SSSDEGGV GF V+DSVYLT
Sbjct: 434 GCWHKDHAVSELGIFSTYLRNKDRVVMNNQSGYLMRTKISSSDEGGVAAGFAVLDSVYLT 493
>emb|CAB91078.1| homoglutathione synthetase [Glycine max]
Length = 499
Score = 198 bits (503), Expect = 5e-50
Identities = 94/120 (78%), Positives = 110/120 (91%)
Frame = -3
Query: 574 EKPELFVMKPQREGGGTNIYGDDLRETLIKLQKSGSEEDAAYILMQRIFPTSTAAILMRN 395
E PELFVMKPQREGGG NIYGD+LRETL+KLQ++GS+EDAAYILMQRIFP ++ AIL+R+
Sbjct: 380 ENPELFVMKPQREGGGNNIYGDELRETLLKLQEAGSQEDAAYILMQRIFPATSPAILVRD 439
Query: 394 GCWHKDHVLTEFGIFGTYLRNKDKVIINSESGYMVRTKMSSSDEGGVLPGFGVIDSVYLT 215
G W HV++E GIFGTYLRNKDK+IIN+ESGYMVRTK+SSS EGGVLPGFGV+D+VYLT
Sbjct: 440 GNWDTGHVISEAGIFGTYLRNKDKIIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYLT 499
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,666,540
Number of Sequences: 1393205
Number of extensions: 11303745
Number of successful extensions: 28007
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 27309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27954
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
