Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004552A_C01 KMC004552A_c01
(577 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05865 hypothetical protein T29A15.90 - Arabidopsis thalian... 216 2e-55
gb|AAM66103.1| carbohydrate kinase-like protein [Arabidopsis tha... 216 2e-55
ref|NP_567780.1| carbohydrate kinase - like protein; protein id:... 216 2e-55
gb|AAK00437.1|AC060755_7 putative adenosine kinase [Oryza sativa] 195 4e-49
ref|NP_711573.1| ribokinase [Leptospira interrogans serovar lai ... 79 5e-14
>pir||T05865 hypothetical protein T29A15.90 - Arabidopsis thaliana
gi|4469011|emb|CAB38272.1| carbohydrate kinase-like
protein [Arabidopsis thaliana]
gi|7269614|emb|CAB81410.1| carbohydrate kinase-like
protein [Arabidopsis thaliana]
Length = 406
Score = 216 bits (550), Expect = 2e-55
Identities = 101/141 (71%), Positives = 120/141 (84%)
Frame = -3
Query: 575 FWEIVGNYADLIFANSDEARALCNFDAKENTASVTRYLSQFVPLVSVTDGPKGSYIGVNG 396
FW+IVGNYAD++FANSDEARA C+F A+E+ S TRY+S FVP VSVTDG GSYIGV G
Sbjct: 261 FWDIVGNYADIVFANSDEARAFCHFSAEESPISATRYMSHFVPFVSVTDGINGSYIGVKG 320
Query: 395 EAVYIPPSPCVPVDTCGAGDAYASGILYGVSRGISDVRSIGTIASKVAATVVGQQGTRLR 216
EA+YIPPSPCVPVDTCGAGDAYASGILYG+ RG+SD++ +G +A+ +AATVVGQQGTRLR
Sbjct: 321 EAIYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGDMAATIAATVVGQQGTRLR 380
Query: 215 VSDAAKLAESFAFQLGRSTIR 153
V DA +LA S AF+L S +R
Sbjct: 381 VQDAVELARSHAFRLNGSGVR 401
>gb|AAM66103.1| carbohydrate kinase-like protein [Arabidopsis thaliana]
Length = 471
Score = 216 bits (550), Expect = 2e-55
Identities = 101/141 (71%), Positives = 120/141 (84%)
Frame = -3
Query: 575 FWEIVGNYADLIFANSDEARALCNFDAKENTASVTRYLSQFVPLVSVTDGPKGSYIGVNG 396
FW+IVGNYAD++FANSDEARA C+F A+E+ S TRY+S FVP VSVTDG GSYIGV G
Sbjct: 326 FWDIVGNYADIVFANSDEARAFCHFSAEESPISATRYMSHFVPFVSVTDGINGSYIGVKG 385
Query: 395 EAVYIPPSPCVPVDTCGAGDAYASGILYGVSRGISDVRSIGTIASKVAATVVGQQGTRLR 216
EA+YIPPSPCVPVDTCGAGDAYASGILYG+ RG+SD++ +G +A+ +AATVVGQQGTRLR
Sbjct: 386 EAIYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGDMAATIAATVVGQQGTRLR 445
Query: 215 VSDAAKLAESFAFQLGRSTIR 153
V DA +LA S AF+L S +R
Sbjct: 446 VQDAVELARSHAFRLNGSGVR 466
>ref|NP_567780.1| carbohydrate kinase - like protein; protein id: At4g27600.1,
supported by cDNA: 799., supported by cDNA: gi_15450506,
supported by cDNA: gi_16974332 [Arabidopsis thaliana]
gi|15450507|gb|AAK96546.1| AT4g27600/T29A15_90
[Arabidopsis thaliana] gi|16974333|gb|AAL31151.1|
AT4g27600/T29A15_90 [Arabidopsis thaliana]
Length = 471
Score = 216 bits (550), Expect = 2e-55
Identities = 101/141 (71%), Positives = 120/141 (84%)
Frame = -3
Query: 575 FWEIVGNYADLIFANSDEARALCNFDAKENTASVTRYLSQFVPLVSVTDGPKGSYIGVNG 396
FW+IVGNYAD++FANSDEARA C+F A+E+ S TRY+S FVP VSVTDG GSYIGV G
Sbjct: 326 FWDIVGNYADIVFANSDEARAFCHFSAEESPISATRYMSHFVPFVSVTDGINGSYIGVKG 385
Query: 395 EAVYIPPSPCVPVDTCGAGDAYASGILYGVSRGISDVRSIGTIASKVAATVVGQQGTRLR 216
EA+YIPPSPCVPVDTCGAGDAYASGILYG+ RG+SD++ +G +A+ +AATVVGQQGTRLR
Sbjct: 386 EAIYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGDMAATIAATVVGQQGTRLR 445
Query: 215 VSDAAKLAESFAFQLGRSTIR 153
V DA +LA S AF+L S +R
Sbjct: 446 VQDAVELARSHAFRLNGSGVR 466
>gb|AAK00437.1|AC060755_7 putative adenosine kinase [Oryza sativa]
Length = 458
Score = 195 bits (495), Expect = 4e-49
Identities = 93/135 (68%), Positives = 109/135 (79%)
Frame = -3
Query: 575 FWEIVGNYADLIFANSDEARALCNFDAKENTASVTRYLSQFVPLVSVTDGPKGSYIGVNG 396
FW+IV NYAD++FAN++EARA C + ++ S RYLS VPLVSVTDG GSYIGV G
Sbjct: 307 FWDIVTNYADILFANANEARAFCELSSTDSPMSAARYLSHSVPLVSVTDGVHGSYIGVKG 366
Query: 395 EAVYIPPSPCVPVDTCGAGDAYASGILYGVSRGISDVRSIGTIASKVAATVVGQQGTRLR 216
EA+YIPP PCVP+DTCGAGDAYASGILYG+ RG SD++SIG +AS+VAA VV QQGTRLR
Sbjct: 367 EAIYIPPPPCVPIDTCGAGDAYASGILYGILRGSSDLKSIGLLASRVAAIVVAQQGTRLR 426
Query: 215 VSDAAKLAESFAFQL 171
V DA +LAESF L
Sbjct: 427 VQDADRLAESFTLHL 441
>ref|NP_711573.1| ribokinase [Leptospira interrogans serovar lai str. 56601]
gi|24194973|gb|AAN48591.1|AE011318_9 ribokinase
[Leptospira interrogans serovar lai str. 56601]
Length = 328
Score = 78.6 bits (192), Expect = 5e-14
Identities = 41/121 (33%), Positives = 69/121 (56%)
Frame = -3
Query: 575 FWEIVGNYADLIFANSDEARALCNFDAKENTASVTRYLSQFVPLVSVTDGPKGSYIGVNG 396
F + Y D++F N++EA+AL +E+ +++S LV +TD G+Y NG
Sbjct: 201 FIRLTKEYFDIVFCNTEEAKALSQ---REDKLEALKFISGLSALVFMTDSANGAYFAENG 257
Query: 395 EAVYIPPSPCVPVDTCGAGDAYASGILYGVSRGISDVRSIGTIASKVAATVVGQQGTRLR 216
+ ++ P P+DT GAGD +A+G+LYG++ G S +S + VA+ +V + G RL
Sbjct: 258 KISHVDGFPVKPIDTTGAGDCFAAGVLYGITHGFSLEKST-RWGNYVASRIVQEVGPRLG 316
Query: 215 V 213
+
Sbjct: 317 I 317
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 487,310,156
Number of Sequences: 1393205
Number of extensions: 10598780
Number of successful extensions: 35054
Number of sequences better than 10.0: 385
Number of HSP's better than 10.0 without gapping: 33398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34906
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
