Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004531A_C03 KMC004531A_c03
(576 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O22585|AMYB_MEDSA BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDRO... 239 2e-62
sp|O64407|AMYB_VIGUN BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDRO... 229 2e-59
sp|O65015|AMYB_TRIRP BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDRO... 222 3e-57
gb|AAK30294.1|AF353207_1 beta-amylase [Castanea crenata] 207 8e-53
dbj|BAA09462.1| beta-amylase [Glycine max] gi|2196550|dbj|BAA204... 203 1e-51
>sp|O22585|AMYB_MEDSA BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
gi|7435334|pir||T09300 beta-amylase (EC 3.2.1.2) -
alfalfa gi|2559006|gb|AAD04188.1| beta-amylase [Medicago
sativa]
Length = 496
Score = 239 bits (609), Expect = 2e-62
Identities = 111/125 (88%), Positives = 119/125 (94%)
Frame = -1
Query: 576 WREHIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKFRMYGVTYLRLSDDLLQQSN 397
WRE+IEVAGENALSRYDATAYNQIILNARPQGVNKDGPPK RMYGVTYLRLSDDL+QQSN
Sbjct: 372 WRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSN 431
Query: 396 FDIFRKFVQKMHADQDYCADPGKYGHIIPPLKRSGPKIPDDVLLKATEPMPPFPWDSETD 217
FDIF+KFV KMHADQDYC+DP KY H IPPLKRSGPKIPDDVL +AT+P+PPFPWDSETD
Sbjct: 432 FDIFKKFVVKMHADQDYCSDPEKYNHGIPPLKRSGPKIPDDVLNEATKPIPPFPWDSETD 491
Query: 216 MEVDG 202
M+VDG
Sbjct: 492 MKVDG 496
>sp|O64407|AMYB_VIGUN BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
gi|7435337|pir||T11575 beta-amylase (EC 3.2.1.2) -
cowpea gi|2995395|emb|CAA12395.1| beta amylase [Vigna
unguiculata]
Length = 496
Score = 229 bits (583), Expect = 2e-59
Identities = 108/125 (86%), Positives = 116/125 (92%)
Frame = -1
Query: 576 WREHIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKFRMYGVTYLRLSDDLLQQSN 397
WRE+IEVAGENALSRYDATAYNQIILNARPQGVNKDGPPK RMYGVTYLRLSD+LLQQSN
Sbjct: 372 WRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSN 431
Query: 396 FDIFRKFVQKMHADQDYCADPGKYGHIIPPLKRSGPKIPDDVLLKATEPMPPFPWDSETD 217
FDIF+KFV KMHADQDYC DP +Y H IPPLKRS PKIP DVL +AT+P+PPFPWDSETD
Sbjct: 432 FDIFKKFVVKMHADQDYCEDPQEYNHGIPPLKRSEPKIPVDVLNEATKPIPPFPWDSETD 491
Query: 216 MEVDG 202
M+VDG
Sbjct: 492 MKVDG 496
>sp|O65015|AMYB_TRIRP BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
gi|7435335|pir||T08117 beta-amylase (EC 3.2.1.2) - white
clover gi|2935474|gb|AAD04259.1| beta-amylase [Trifolium
repens]
Length = 496
Score = 222 bits (565), Expect = 3e-57
Identities = 104/125 (83%), Positives = 114/125 (91%)
Frame = -1
Query: 576 WREHIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKFRMYGVTYLRLSDDLLQQSN 397
WRE+IEVAGENALSRYDATAYNQIILNARPQGVNKDGPPK RMYGVTYLRLSDDLLQ+SN
Sbjct: 372 WRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESN 431
Query: 396 FDIFRKFVQKMHADQDYCADPGKYGHIIPPLKRSGPKIPDDVLLKATEPMPPFPWDSETD 217
F+IF+KFV KMHADQ +C DP +Y H IPPLKRSGP IP D LL+AT+P+ PFPWDSETD
Sbjct: 432 FEIFKKFVVKMHADQSHCDDPQEYNHAIPPLKRSGPNIPVDDLLEATKPILPFPWDSETD 491
Query: 216 MEVDG 202
M+VDG
Sbjct: 492 MKVDG 496
>gb|AAK30294.1|AF353207_1 beta-amylase [Castanea crenata]
Length = 514
Score = 207 bits (527), Expect = 8e-53
Identities = 97/133 (72%), Positives = 111/133 (82%)
Frame = -1
Query: 576 WREHIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKFRMYGVTYLRLSDDLLQQSN 397
WRE++EVAGENAL RYD AYNQI+LNARP GVNK+GPPK RMYGVTYLRLSDDLLQ++N
Sbjct: 376 WRENLEVAGENALPRYDRDAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLQENN 435
Query: 396 FDIFRKFVQKMHADQDYCADPGKYGHIIPPLKRSGPKIPDDVLLKATEPMPPFPWDSETD 217
F+IF+ FV+KMHADQDYC DP KY H I PL+RS PK+P + LL+ATEPM PFPWD ETD
Sbjct: 436 FNIFKTFVKKMHADQDYCPDPEKYSHHIGPLERSKPKMPIEYLLEATEPMEPFPWDKETD 495
Query: 216 MEVDG*LSGSMGK 178
M V G LS + K
Sbjct: 496 MSVGGALSNLIDK 508
>dbj|BAA09462.1| beta-amylase [Glycine max] gi|2196550|dbj|BAA20453.1| beta-amylase
[Glycine max]
Length = 496
Score = 203 bits (517), Expect = 1e-51
Identities = 97/125 (77%), Positives = 107/125 (85%)
Frame = -1
Query: 576 WREHIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKFRMYGVTYLRLSDDLLQQSN 397
WRE I VAGENAL RYDATAYNQIILNARPQGVN +GPPK M+GVTYLRLSDDLLQ+SN
Sbjct: 372 WREDIRVAGENALPRYDATAYNQIILNARPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSN 431
Query: 396 FDIFRKFVQKMHADQDYCADPGKYGHIIPPLKRSGPKIPDDVLLKATEPMPPFPWDSETD 217
F+IF+KFV KMHADQDYCA+P KY H I PLK S PKIP +VLL+AT+P PFPW ETD
Sbjct: 432 FNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTLPFPWLPETD 491
Query: 216 MEVDG 202
M+VDG
Sbjct: 492 MKVDG 496
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,645,276
Number of Sequences: 1393205
Number of extensions: 11184161
Number of successful extensions: 28093
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 27274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28038
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
