Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004509A_C01 KMC004509A_c01
(538 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_233823.1| similar to hypothetical protein MGC33926 [Homo ... 37 0.15
ref|NP_055726.1| adaptor-associated kinase 1; KIAA1048 protein [... 34 0.98
ref|XP_111641.2| similar to putative proline-rich protein; prote... 33 2.2
ref|NP_523797.1| Toll-7 CG8595-PA gi|7302428|gb|AAF57514.1| CG85... 32 6.3
pir||B71402 hypothetical protein - Arabidopsis thaliana gi|22447... 32 6.3
>ref|XP_233823.1| similar to hypothetical protein MGC33926 [Homo sapiens] [Rattus
norvegicus]
Length = 846
Score = 37.0 bits (84), Expect = 0.15
Identities = 25/86 (29%), Positives = 43/86 (49%), Gaps = 7/86 (8%)
Frame = +1
Query: 241 SEGNMKGQRQKSIEMKPEQLHPPIVLPGSAA--SDYIQTKHQQQN-----MLSKAYLEQP 399
+ G +G++ SI+ P HP + P + S + HQ + + S + QP
Sbjct: 570 NNGEDRGEKPHSIQFSPAPQHPVLTSPTATVLTSPTTSSFHQPHSIQFSPLYSISSSHQP 629
Query: 400 LSLASHQQNMLSKAYLEQPLSFASHQ 477
S++SHQ + +S ++ QP S +SHQ
Sbjct: 630 HSISSHQPHSISSSH--QPHSTSSHQ 653
>ref|NP_055726.1| adaptor-associated kinase 1; KIAA1048 protein [Homo sapiens]
gi|5689433|dbj|BAA83000.1| KIAA1048 protein [Homo
sapiens]
Length = 863
Score = 34.3 bits (77), Expect = 0.98
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Frame = +1
Query: 262 QRQKSIEMKPEQLHP----------PIVLPGSAASDYIQTKHQQQNMLSKAYLEQPLSLA 411
Q+Q++ + + +HP P+V G + +Q +QQQ + +Q L+ A
Sbjct: 491 QQQQAQTQQFQAVHPATQQPAIAQFPVVSQGGSQQQLMQNFYQQQQQQQQQQQQQQLATA 550
Query: 412 SHQQNMLS-KAYLEQPLSFASHQ*NMLSKAYLEQP 513
HQQ +++ +A L+Q + A+ Q A QP
Sbjct: 551 LHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQP 585
>ref|XP_111641.2| similar to putative proline-rich protein; protein id: At2g29210.1
[Arabidopsis thaliana] [Mus musculus]
gi|28496894|ref|XP_207346.2| similar to putative
proline-rich protein; protein id: At2g29210.1
[Arabidopsis thaliana] [Mus musculus]
Length = 221
Score = 33.1 bits (74), Expect = 2.2
Identities = 19/77 (24%), Positives = 37/77 (47%), Gaps = 2/77 (2%)
Frame = +1
Query: 307 PIVLPGSAASDYIQTKHQQQNMLSKAYLEQPLSLASHQQNMLSKA-YLEQPLSFASHQ*N 483
P+ L + S T H + ++ + PL+L SH + L+ + + PL+ +H +
Sbjct: 75 PLALTNHSDSPLALTNHSDSPLALTSHSDSPLALTSHSDSPLALTNHSDSPLALTNHSDS 134
Query: 484 MLSKA-YLEQPLSFVSH 531
L+ + + PL+ SH
Sbjct: 135 PLALTNHSDSPLALTSH 151
Score = 32.0 bits (71), Expect = 4.8
Identities = 18/77 (23%), Positives = 37/77 (47%), Gaps = 2/77 (2%)
Frame = +1
Query: 307 PIVLPGSAASDYIQTKHQQQNMLSKAYLEQPLSLASHQQNMLSKA-YLEQPLSFASHQ*N 483
P+ L + S T H + ++ + PL+L +H + L+ + + PL+ +H +
Sbjct: 125 PLALTNHSDSPLALTNHSDSPLALTSHSDSPLALTNHSDSPLALTNHSDSPLALTNHSDS 184
Query: 484 MLSKA-YLEQPLSFVSH 531
L+ + + PL+ SH
Sbjct: 185 PLALTNHSDSPLTLTSH 201
Score = 31.6 bits (70), Expect = 6.3
Identities = 18/77 (23%), Positives = 37/77 (47%), Gaps = 2/77 (2%)
Frame = +1
Query: 307 PIVLPGSAASDYIQTKHQQQNMLSKAYLEQPLSLASHQQNMLS-KAYLEQPLSFASHQ*N 483
P+ L + S T H + + + PL+L SH + L+ ++ + PL+ +H +
Sbjct: 65 PLTLTNHSDSPLALTNHSDSPLALTNHSDSPLALTSHSDSPLALTSHSDSPLALTNHSDS 124
Query: 484 MLSKA-YLEQPLSFVSH 531
L+ + + PL+ +H
Sbjct: 125 PLALTNHSDSPLALTNH 141
>ref|NP_523797.1| Toll-7 CG8595-PA gi|7302428|gb|AAF57514.1| CG8595-PA [Drosophila
melanogaster] gi|9246963|gb|AAF86225.1|AF247765_1 Toll-7
[Drosophila melanogaster]
Length = 1446
Score = 31.6 bits (70), Expect = 6.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 262 QRQKSIEMKPEQLHPPIVLPGSAASDYIQTKHQQQNMLSKAYLEQ--PLSLASHQQNMLS 435
QR ++ K EQLH G+ S Q HQQQ + +Q P +++ QQ
Sbjct: 1382 QRAQTWRPKREQLHLQQAQAGTLGSKASQAAHQQQQQQQQQQQQQPNPTAVSGQQQGPHV 1441
Query: 436 KAYL 447
+AYL
Sbjct: 1442 QAYL 1445
>pir||B71402 hypothetical protein - Arabidopsis thaliana
gi|2244765|emb|CAB10188.1| hypothetical protein
[Arabidopsis thaliana] gi|7268114|emb|CAB78451.1|
hypothetical protein [Arabidopsis thaliana]
Length = 1047
Score = 31.6 bits (70), Expect = 6.3
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 416 ISRIC*VKPIWNSLSPLQVISRIC*VKPIWNSLSPL*VISS 538
I RIC VK ++ S + LQV++ C PI+N+L+ L + S+
Sbjct: 942 IMRICNVKTLYLSANTLQVLTYSCDAIPIFNNLTHLTIESN 982
Score = 31.2 bits (69), Expect = 8.3
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 416 ISRIC*VKPIWNSLSPLQVISRIC*VKPIWNSLSPL*VISS 538
I RIC VK ++ S + LQV++ C PI+N+L+ L + S+
Sbjct: 522 IMRICNVKTLYLSSNTLQVLTYSCDAIPIFNNLTHLTIESN 562
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 457,095,538
Number of Sequences: 1393205
Number of extensions: 9770763
Number of successful extensions: 26307
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26132
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
