Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004467A_C01 KMC004467A_c01
(609 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B84613 hypothetical protein At2g22480 [imported] - Arabidop... 100 1e-20
ref|NP_179834.2| putative pyrophosphate--fructose-6-phosphate 1-... 100 1e-20
gb|AAK98672.1|AC021893_6 Putative pyrophosphate--fructose-6-phos... 92 5e-18
ref|NP_200966.2| pyrophosphate-dependent phosphofructo-1-kinase ... 54 2e-06
ref|NP_194651.1| pyrophosphate-dependent phosphofructo-1-kinase-... 48 1e-04
>pir||B84613 hypothetical protein At2g22480 [imported] - Arabidopsis thaliana
gi|4544445|gb|AAD22353.1| putative
pyrophosphate--fructose-6-phosphate 1-phosphotransferase
[Arabidopsis thaliana]
Length = 463
Score = 100 bits (249), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (91%)
Frame = -1
Query: 609 AFAGYSGITVGLCNTHYAYFPIPEVISHPRLVDPNSRMWHRCLTSTGQPDFI 454
AFAGYSGITVG+ NTHYAY PI EVI++P+ VDPNSRMWHRCLTSTGQPDFI
Sbjct: 412 AFAGYSGITVGIINTHYAYLPITEVIAYPKSVDPNSRMWHRCLTSTGQPDFI 463
>ref|NP_179834.2| putative pyrophosphate--fructose-6-phosphate 1-phosphotransferase;
protein id: At2g22480.1, supported by cDNA: gi_17979344,
supported by cDNA: gi_20466012 [Arabidopsis thaliana]
gi|17979345|gb|AAL49898.1| putative
pyrophosphate-fructose-6-phosphate 1-phosphotransferase
[Arabidopsis thaliana] gi|20466013|gb|AAM20228.1|
putative pyrophosphate-fructose-6-phosphate
1-phosphotransferase [Arabidopsis thaliana]
Length = 537
Score = 100 bits (249), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (91%)
Frame = -1
Query: 609 AFAGYSGITVGLCNTHYAYFPIPEVISHPRLVDPNSRMWHRCLTSTGQPDFI 454
AFAGYSGITVG+ NTHYAY PI EVI++P+ VDPNSRMWHRCLTSTGQPDFI
Sbjct: 486 AFAGYSGITVGIINTHYAYLPITEVIAYPKSVDPNSRMWHRCLTSTGQPDFI 537
>gb|AAK98672.1|AC021893_6 Putative pyrophosphate--fructose-6-phosphate 1-phosphotransferase
[Oryza sativa]
Length = 490
Score = 92.0 bits (227), Expect = 5e-18
Identities = 40/51 (78%), Positives = 42/51 (81%)
Frame = -1
Query: 609 AFAGYSGITVGLCNTHYAYFPIPEVISHPRLVDPNSRMWHRCLTSTGQPDF 457
AFAG+SGIT G+CNTH Y PI EVI R VDPNSRMWHRCLTSTGQPDF
Sbjct: 439 AFAGFSGITTGICNTHNVYLPISEVIKSTRFVDPNSRMWHRCLTSTGQPDF 489
>ref|NP_200966.2| pyrophosphate-dependent phosphofructo-1-kinase - like protein;
protein id: At5g61580.1, supported by cDNA: gi_20466455
[Arabidopsis thaliana] gi|9758473|dbj|BAB09002.1|
pyrophosphate-fructose-6-phosphate
1-phosphotransferase-like protein [Arabidopsis thaliana]
gi|20466456|gb|AAM20545.1| pyrophosphate-dependent
phosphofructo-1-kinase-like protein [Arabidopsis
thaliana] gi|22136390|gb|AAM91273.1|
pyrophosphate-dependent phosphofructo-1-kinase-like
protein [Arabidopsis thaliana]
Length = 530
Score = 53.9 bits (128), Expect = 2e-06
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -1
Query: 609 AFAGYSGITVGLCNTHYAYFPIPEVISHPRLVDPNSRMWHRCLTSTGQPDFI 454
A AGYSG TVG N+ +AY PI +V V RMW R L ST QP F+
Sbjct: 453 AMAGYSGFTVGPVNSRHAYIPISQVTEVTNTVKLTDRMWARLLASTNQPSFL 504
>ref|NP_194651.1| pyrophosphate-dependent phosphofructo-1-kinase-like protein;
protein id: At4g29220.1 [Arabidopsis thaliana]
gi|7434214|pir||T13433 pyrophosphate-dependent
phosphofructo-1-kinase homolog T17A13.40 - Arabidopsis
thaliana gi|7269820|emb|CAB79680.1|
pyrophosphate-dependent phosphofructo-1-kinase-like
protein [Arabidopsis thaliana]
Length = 473
Score = 47.8 bits (112), Expect = 1e-04
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = -1
Query: 603 AGYSGITVGLCNTHYAYFPIPEVISHPRLVDPNSRMWHRCLTSTGQPDFI 454
AGY+G TVGL N + Y P + V RMW R L+ST QP F+
Sbjct: 404 AGYNGFTVGLVNGRHTYIPFNRITEKQNKVVITDRMWARLLSSTNQPSFM 453
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 487,913,707
Number of Sequences: 1393205
Number of extensions: 9721309
Number of successful extensions: 16579
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16579
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
