Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004448A_C01 KMC004448A_c01
(553 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC95155.1| putative resistance protein [Lycopersicon escule... 39 0.032
ref|NP_172815.1| longevity assurance protein, putative; protein ... 35 0.46
ref|NP_566769.1| expressed protein; protein id: At3g25540.1, sup... 35 0.46
>emb|CAC95155.1| putative resistance protein [Lycopersicon esculentum]
Length = 303
Score = 39.3 bits (90), Expect = 0.032
Identities = 17/19 (89%), Positives = 19/19 (99%)
Frame = -2
Query: 552 ARGKLSEDVRSDSEDEHED 496
ARG+LS+DVRSDSEDEHED
Sbjct: 285 ARGQLSDDVRSDSEDEHED 303
>ref|NP_172815.1| longevity assurance protein, putative; protein id: At1g13580.1
[Arabidopsis thaliana] gi|25518747|pir||H86268
hypothetical protein F13B4.7 - Arabidopsis thaliana
gi|9802756|gb|AAF99825.1|AC027134_7 Highly similar to
fungal resistance protein Asc [Arabidopsis thaliana]
Length = 308
Score = 35.4 bits (80), Expect = 0.46
Identities = 18/20 (90%), Positives = 18/20 (90%), Gaps = 2/20 (10%)
Frame = -2
Query: 549 RGKLSEDVRSDS--EDEHED 496
RGKLSEDVRSDS EDEHED
Sbjct: 289 RGKLSEDVRSDSEGEDEHED 308
>ref|NP_566769.1| expressed protein; protein id: At3g25540.1, supported by cDNA:
gi_13430479, supported by cDNA: gi_7658238 [Arabidopsis
thaliana] gi|7658239|gb|AAF66102.1|AF198179_1 LAG1
homolog 1 [Arabidopsis thaliana]
gi|9279733|dbj|BAB01323.1| gene_id:MWL2.19~unknown
protein [Arabidopsis thaliana]
gi|13430480|gb|AAK25862.1|AF360152_1 unknown protein
[Arabidopsis thaliana] gi|23296770|gb|AAN13166.1|
unknown protein [Arabidopsis thaliana]
Length = 310
Score = 35.4 bits (80), Expect = 0.46
Identities = 18/20 (90%), Positives = 18/20 (90%), Gaps = 2/20 (10%)
Frame = -2
Query: 549 RGKLSEDVRSDSE--DEHED 496
RGKLSEDVRSDSE DEHED
Sbjct: 291 RGKLSEDVRSDSESDDEHED 310
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 431,012,772
Number of Sequences: 1393205
Number of extensions: 8738334
Number of successful extensions: 17277
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17270
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
