Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004423A_C01 KMC004423A_c01
(435 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199059.1| serine/threonine protein kinase-like protein; p... 89 1e-17
dbj|BAB08731.1| receptor-like protein kinase [Arabidopsis thaliana] 62 1e-09
gb|AAM13186.1| putative receptor-like protein kinase [Arabidopsi... 62 1e-09
ref|NP_180000.2| leucine-rich repeat transmembrane protein kinas... 62 1e-09
ref|NP_201371.1| leucine-rich repeat transmembrane protein kinas... 62 1e-09
>ref|NP_199059.1| serine/threonine protein kinase-like protein; protein id:
At5g42440.1 [Arabidopsis thaliana]
gi|9759480|dbj|BAB10485.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
Length = 359
Score = 89.4 bits (220), Expect = 1e-17
Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = -1
Query: 435 ANKKVDVYSFGVLMMETASGHRPNLAVRFDGVDIGLVQWARKMKEQGAEMKMVD-EKISR 259
A K DVYSFGVLM+E A+ RPNL V D ++GL QWA M EQ +M+D +
Sbjct: 260 ATVKADVYSFGVLMLELATRRRPNLTVVVDEKEVGLAQWAVIMVEQNRCYEMLDFGGVCG 319
Query: 258 DEEGLREESVKEYIRIACMCAGELQKERPQMVEVVKLLESMPHF 127
E+G V+EY RIAC+C E +ERP MV+VV+LLE + F
Sbjct: 320 SEKG-----VEEYFRIACLCIKESTRERPTMVQVVELLEELCRF 358
>dbj|BAB08731.1| receptor-like protein kinase [Arabidopsis thaliana]
Length = 872
Score = 62.4 bits (150), Expect = 1e-09
Identities = 37/95 (38%), Positives = 52/95 (53%)
Frame = -1
Query: 426 KVDVYSFGVLMMETASGHRPNLAVRFDGVDIGLVQWARKMKEQGAEMKMVDEKISRDEEG 247
K DVYS+G+L++E G R NL + +D D WA K G +K VD+++ E
Sbjct: 712 KADVYSYGMLLLEIVGGRR-NLDMSYDAEDFFYPGWAYKELTNGTSLKAVDKRLQGVAE- 769
Query: 246 LREESVKEYIRIACMCAGELQKERPQMVEVVKLLE 142
EE V + +++A C + RP M EVVKLLE
Sbjct: 770 --EEEVVKALKVAFWCIQDEVSMRPSMGEVVKLLE 802
>gb|AAM13186.1| putative receptor-like protein kinase [Arabidopsis thaliana]
Length = 853
Score = 62.4 bits (150), Expect = 1e-09
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = -1
Query: 426 KVDVYSFGVLMMETASGHRPNLAVRFDGVDIGLVQWARKMKEQGAEMKMVDEKISRDEEG 247
K DVY FGV++ E +G +P D D LV W R + + K +D KI +E
Sbjct: 754 KSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKI---QET 810
Query: 246 LREESVKEYIRIACMCAGELQKERPQMVEVVKLLESM 136
EE ++E ++I +C +L +RP M +VV LL+ +
Sbjct: 811 GSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLKDI 847
>ref|NP_180000.2| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g24230.1, supported by cDNA: gi_20260575
[Arabidopsis thaliana]
Length = 853
Score = 62.4 bits (150), Expect = 1e-09
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = -1
Query: 426 KVDVYSFGVLMMETASGHRPNLAVRFDGVDIGLVQWARKMKEQGAEMKMVDEKISRDEEG 247
K DVY FGV++ E +G +P D D LV W R + + K +D KI +E
Sbjct: 754 KSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKI---QET 810
Query: 246 LREESVKEYIRIACMCAGELQKERPQMVEVVKLLESM 136
EE ++E ++I +C +L +RP M +VV LL+ +
Sbjct: 811 GSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLKDI 847
>ref|NP_201371.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g65700.1, supported by cDNA: gi_20466695
[Arabidopsis thaliana] gi|7434429|pir||T05898
hypothetical protein F6H11.170 - Arabidopsis thaliana
gi|2827715|emb|CAA16688.1| receptor protein kinase - like
protein [Arabidopsis thaliana]
gi|10177328|dbj|BAB10677.1| receptor protein kinase-like
protein [Arabidopsis thaliana] gi|20466696|gb|AAM20665.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 1003
Score = 62.4 bits (150), Expect = 1e-09
Identities = 39/109 (35%), Positives = 60/109 (54%), Gaps = 2/109 (1%)
Frame = -1
Query: 432 NKKVDVYSFGVLMMETASGHRPNLAVRFDGVDIGLVQWARKMKEQGAE--MKMVDEKISR 259
++K DVYSFGV+++E +G +P + DGVDI VQW RKM + + +K++D ++S
Sbjct: 875 DEKSDVYSFGVVLLELVTGRKP-VGEFGDGVDI--VQWVRKMTDSNKDSVLKVLDPRLS- 930
Query: 258 DEEGLREESVKEYIRIACMCAGELQKERPQMVEVVKLLESMPHFDYQND 112
+ V +A +C E ERP M EVV++L +P D
Sbjct: 931 ---SIPIHEVTHVFYVAMLCVEEQAVERPTMREVVQILTEIPKLPPSKD 976
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 403,398,779
Number of Sequences: 1393205
Number of extensions: 9846147
Number of successful extensions: 59859
Number of sequences better than 10.0: 2270
Number of HSP's better than 10.0 without gapping: 43078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55094
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 6756111528
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
