Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004407A_C01 KMC004407A_c01
(620 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567241.1| putative glycosyltransferase; protein id: At4g0... 91 1e-17
pir||H85031 probable glycosyltransferase [imported] - Arabidopsi... 89 6e-17
ref|NP_191831.1| alpha galactosyltransferase-like protein; prote... 79 6e-14
ref|NP_177578.1| putative alpha galactosyltransferase; protein i... 45 6e-04
pir||F86320 hypothetical protein F6A14.20 - Arabidopsis thaliana... 45 8e-04
>ref|NP_567241.1| putative glycosyltransferase; protein id: At4g02500.1, supported by
cDNA: gi_16209668 [Arabidopsis thaliana]
gi|7487013|pir||T01300 hypothetical protein T14P8.23 -
Arabidopsis thaliana gi|3193287|gb|AAC19271.1|
Arabidopsis predicted protein of unknown function
T10P11.19 (GB:AC002330) [Arabidopsis thaliana]
gi|9716844|emb|CAC01674.1| putative golgi
glycosyltransferase [Arabidopsis thaliana]
gi|16209669|gb|AAL14393.1| AT4g02500/T10P11_20
[Arabidopsis thaliana] gi|22655160|gb|AAM98170.1|
putative glycosyltransferase [Arabidopsis thaliana]
Length = 461
Score = 90.9 bits (224), Expect = 1e-17
Identities = 42/51 (82%), Positives = 49/51 (95%)
Frame = -1
Query: 620 NQILQMYGFTHKSLASRRVKRVRNESSNPLHVKDELGLLHPAFKAIKLPTS 468
NQILQ+YGFTHKSLASR+VKRVRNE+SNPL +KDELGLLHPAFKA+K+ T+
Sbjct: 409 NQILQIYGFTHKSLASRKVKRVRNETSNPLEMKDELGLLHPAFKAVKVQTN 459
>pir||H85031 probable glycosyltransferase [imported] - Arabidopsis thaliana
gi|3892054|gb|AAC78266.1|AAC78266 putative
glycosyltransferase [Arabidopsis thaliana]
gi|7269010|emb|CAB80743.1| putative glycosyltransferase
[Arabidopsis thaliana]
Length = 459
Score = 88.6 bits (218), Expect = 6e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -1
Query: 620 NQILQMYGFTHKSLASRRVKRVRNESSNPLHVKDELGLLHPAFKAIK 480
NQILQ+YGFTHKSLASR+VKRVRNE+SNPL +KDELGLLHPAFKA+K
Sbjct: 409 NQILQIYGFTHKSLASRKVKRVRNETSNPLEMKDELGLLHPAFKAVK 455
>ref|NP_191831.1| alpha galactosyltransferase-like protein; protein id: At3g62720.1,
supported by cDNA: gi_15983425 [Arabidopsis thaliana]
gi|11281898|pir||T48061 alpha galactosyltransferase-like
protein - Arabidopsis thaliana
gi|7362752|emb|CAB83122.1| alpha
galactosyltransferase-like protein [Arabidopsis
thaliana] gi|15983426|gb|AAL11581.1|AF424587_1
AT3g62720/F26K9_150 [Arabidopsis thaliana]
gi|25141201|gb|AAN73295.1| At3g62720/F26K9_150
[Arabidopsis thaliana]
Length = 460
Score = 78.6 bits (192), Expect = 6e-14
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = -1
Query: 620 NQILQMYGFTHKSLASRRVKRVRNESSNPLHVKDELGLLHPAFKAIKLPTSS 465
NQILQMYGFTHKSL SRRVK RN++ PL KDE GLLHP FKA KL T++
Sbjct: 408 NQILQMYGFTHKSLGSRRVKPTRNQTDRPLDAKDEFGLLHPPFKAAKLSTTT 459
>ref|NP_177578.1| putative alpha galactosyltransferase; protein id: At1g74380.1,
supported by cDNA: gi_20260551 [Arabidopsis thaliana]
gi|25349321|pir||E96772 hypothetical protein F1M20.6
[imported] - Arabidopsis thaliana
gi|12324812|gb|AAG52374.1|AC011765_26 putative alpha
galactosyltransferase; 16168-17541 [Arabidopsis
thaliana] gi|20260552|gb|AAM13174.1| putative alpha
galactosyltransferase [Arabidopsis thaliana]
Length = 457
Score = 45.4 bits (106), Expect = 6e-04
Identities = 17/38 (44%), Positives = 29/38 (75%)
Frame = -1
Query: 620 NQILQMYGFTHKSLASRRVKRVRNESSNPLHVKDELGL 507
NQ+L++YGF+H+ L S ++KR+RNE+ +PL D+ +
Sbjct: 409 NQVLKLYGFSHRGLLSPKIKRIRNETVSPLEFVDKFDI 446
>pir||F86320 hypothetical protein F6A14.20 - Arabidopsis thaliana
gi|6730715|gb|AAF27110.1|AC011809_19 Similar to
galactosyltransferase [Arabidopsis thaliana]
Length = 513
Score = 45.1 bits (105), Expect = 8e-04
Identities = 17/38 (44%), Positives = 29/38 (75%)
Frame = -1
Query: 620 NQILQMYGFTHKSLASRRVKRVRNESSNPLHVKDELGL 507
NQ+L++YGF+H+ L S ++KR+RNE+ +PL D+ +
Sbjct: 467 NQVLKLYGFSHRGLLSPKIKRIRNETVSPLESVDKFDI 504
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 442,834,334
Number of Sequences: 1393205
Number of extensions: 8242968
Number of successful extensions: 15672
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15666
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25017613016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
