Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004333A_C01 KMC004333A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF34134.1| high molecular weight heat shock protein [Malus x... 147 5e-35
pir||S44168 dnaK-type molecular chaperone HSC71.0 - garden pea g... 139 1e-32
emb|CAB72129.1| heat shock protein 70 [Cucumis sativus] 134 8e-31
gb|AAN86275.1| non-cell-autonomous heat shock cognate protein 70... 132 2e-30
dbj|BAA34919.1| heat shock protein 70 cognate [Salix gilgiana] 129 1e-29
>gb|AAF34134.1| high molecular weight heat shock protein [Malus x domestica]
Length = 650
Score = 147 bits (372), Expect = 5e-35
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -2
Query: 505 LDSADKTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG 326
LD+ADK KIEDAI+QAIQWL+ NQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG
Sbjct: 568 LDAADKKKIEDAIDQAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG 627
Query: 325 GAAEEEYAPSGGSGAGPKIEEVD 257
G +E+ P+GGS AGPKIEEVD
Sbjct: 628 GGMDEDVPPAGGSSAGPKIEEVD 650
>pir||S44168 dnaK-type molecular chaperone HSC71.0 - garden pea
gi|473217|emb|CAA83548.1| PsHSC71.0 [Pisum sativum]
Length = 647
Score = 139 bits (351), Expect = 1e-32
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = -2
Query: 505 LDSADKTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG 326
LDS DK KIED IEQAIQWL+SNQLAEADEFEDKMKELES+CNPIIAKMYQGGA GPD+G
Sbjct: 567 LDSEDKKKIEDTIEQAIQWLDSNQLAEADEFEDKMKELESVCNPIIAKMYQGGA-GPDMG 625
Query: 325 GAAEEEYAPSGGSGAGPKIEEVD 257
AA+++ AP+GGSGAGPKIEEVD
Sbjct: 626 AAADDD-APTGGSGAGPKIEEVD 647
>emb|CAB72129.1| heat shock protein 70 [Cucumis sativus]
Length = 652
Score = 134 bits (336), Expect = 8e-31
Identities = 68/86 (79%), Positives = 75/86 (87%), Gaps = 3/86 (3%)
Frame = -2
Query: 505 LDSADKTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG 326
LD ADK KIEDAIEQA+QWL++NQLAEADEFEDKMKELESICNPI+AKMYQ GAGGP +G
Sbjct: 568 LDPADKKKIEDAIEQAVQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQ-GAGGPGMG 626
Query: 325 GAA---EEEYAPSGGSGAGPKIEEVD 257
G A ++ PSGGSGAGPKIEEVD
Sbjct: 627 GGAMDDDDAPPPSGGSGAGPKIEEVD 652
>gb|AAN86275.1| non-cell-autonomous heat shock cognate protein 70 [Cucurbita
maxima]
Length = 652
Score = 132 bits (332), Expect = 2e-30
Identities = 68/86 (79%), Positives = 75/86 (87%), Gaps = 3/86 (3%)
Frame = -2
Query: 505 LDSADKTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG 326
LD ADK KIEDAIE A+QWL++NQLAEADEFEDKMKELESICNPI+AKMYQ GAGGP +G
Sbjct: 568 LDPADKKKIEDAIEGAVQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQ-GAGGPGMG 626
Query: 325 GAA---EEEYAPSGGSGAGPKIEEVD 257
GAA ++ PSGGSGAGPKIEEVD
Sbjct: 627 GAAMDDDDVPPPSGGSGAGPKIEEVD 652
>dbj|BAA34919.1| heat shock protein 70 cognate [Salix gilgiana]
Length = 408
Score = 129 bits (325), Expect = 1e-29
Identities = 65/83 (78%), Positives = 71/83 (85%)
Frame = -2
Query: 505 LDSADKTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVG 326
L + DK KIEDAI+QAIQWL+SNQLAEADEFEDKMKELESICNPIIAKMYQG G D+G
Sbjct: 328 LGADDKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQG--AGADMG 385
Query: 325 GAAEEEYAPSGGSGAGPKIEEVD 257
G E++ PSG SGAGPKIEEVD
Sbjct: 386 GGMEDDAPPSGSSGAGPKIEEVD 408
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,049,311
Number of Sequences: 1393205
Number of extensions: 9994617
Number of successful extensions: 76766
Number of sequences better than 10.0: 915
Number of HSP's better than 10.0 without gapping: 49706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72326
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
