Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004251A_C01 KMC004251A_c01
(400 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK98703.1|AC069158_15 Putative PAP-specific phosphatase [Ory... 127 6e-37
gb|AAB94051.1| PAP-specific phosphatase; HAL2-like protein [Arab... 120 6e-33
ref|NP_200250.1| putative protein; protein id: At5g54390.1, supp... 120 6e-33
ref|NP_201203.1| 3(2),5-bisphosphate nucleotidase; protein id: A... 70 8e-12
sp|Q40639|DPNP_ORYSA 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (3'(2')... 70 8e-12
>gb|AAK98703.1|AC069158_15 Putative PAP-specific phosphatase [Oryza sativa]
Length = 463
Score = 127 bits (318), Expect(2) = 6e-37
Identities = 58/80 (72%), Positives = 69/80 (85%)
Frame = -3
Query: 320 EVFMKFARAGQKEKIWDHAAGVIIIQEAGGMVTDAGGDPLDFTNGSCLEGLDRGIVACAG 141
E+FMKFARAG KEKIWDHAAGV+II+EAGG++TDAGG PLDF+ G LEGLDRGI+AC+G
Sbjct: 384 EIFMKFARAGYKEKIWDHAAGVVIIREAGGVITDAGGRPLDFSRGVFLEGLDRGIIACSG 443
Query: 140 ATLHEKIIDSVDASWASSCL 81
LH +I+ +VDASW SS L
Sbjct: 444 PLLHHRIVGAVDASWNSSTL 463
Score = 47.4 bits (111), Expect(2) = 6e-37
Identities = 21/27 (77%), Positives = 23/27 (84%)
Frame = -2
Query: 399 ATFCETFENANSNHSFTEGLAHSVGLR 319
ATFCE E AN++HSFT GLAHSVGLR
Sbjct: 337 ATFCEPVEKANTSHSFTAGLAHSVGLR 363
>gb|AAB94051.1| PAP-specific phosphatase; HAL2-like protein [Arabidopsis thaliana]
Length = 373
Score = 120 bits (301), Expect(2) = 6e-33
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = -3
Query: 323 SEVFMKFARAGQKEKIWDHAAGVIIIQEAGGMVTDAGGDPLDFTNGSCLEGLDRGIVACA 144
+EVFMKFA++ KEKIWDHAAGV+I++EAGG+VTDAGG LDF+ G LEGLDRGI+AC+
Sbjct: 293 AEVFMKFAQSSYKEKIWDHAAGVVIVEEAGGVVTDAGGRNLDFSKGVYLEGLDRGIIACS 352
Query: 143 GATLHEKIIDSVDASWASSCL 81
G LHEKII +V ASW SS L
Sbjct: 353 GQVLHEKIIGAVYASWESSSL 373
Score = 40.4 bits (93), Expect(2) = 6e-33
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2
Query: 399 ATFCETFENANSNHSFTEGLAHSVGLR 319
AT CE E ANSNH FT GLA+S+G+R
Sbjct: 247 ATVCEPVERANSNHLFTAGLANSMGVR 273
>ref|NP_200250.1| putative protein; protein id: At5g54390.1, supported by cDNA:
253770., supported by cDNA: gi_1354509, supported by
cDNA: gi_15027982, supported by cDNA: gi_20259200
[Arabidopsis thaliana] gi|1354510|gb|AAB52964.1|
HAL2-like protein gi|8885582|dbj|BAA97512.1| 3'(2'),
5'-bisphosphate nucleotidase protein-like protein
[Arabidopsis thaliana] gi|15027983|gb|AAK76522.1|
unknown protein [Arabidopsis thaliana]
gi|20259201|gb|AAM14316.1| unknown protein [Arabidopsis
thaliana] gi|21554383|gb|AAM63490.1| PAP-specific
phosphatase [Arabidopsis thaliana]
Length = 373
Score = 120 bits (301), Expect(2) = 6e-33
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = -3
Query: 323 SEVFMKFARAGQKEKIWDHAAGVIIIQEAGGMVTDAGGDPLDFTNGSCLEGLDRGIVACA 144
+EVFMKFA++ KEKIWDHAAGV+I++EAGG+VTDAGG LDF+ G LEGLDRGI+AC+
Sbjct: 293 AEVFMKFAQSSYKEKIWDHAAGVVIVEEAGGVVTDAGGRNLDFSKGVYLEGLDRGIIACS 352
Query: 143 GATLHEKIIDSVDASWASSCL 81
G LHEKII +V ASW SS L
Sbjct: 353 GQVLHEKIIGAVYASWESSSL 373
Score = 40.4 bits (93), Expect(2) = 6e-33
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2
Query: 399 ATFCETFENANSNHSFTEGLAHSVGLR 319
AT CE E ANSNH FT GLA+S+G+R
Sbjct: 247 ATVCEPVERANSNHLFTAGLANSMGVR 273
>ref|NP_201203.1| 3(2),5-bisphosphate nucleotidase; protein id: At5g63980.1,
supported by cDNA: gi_15281147 [Arabidopsis thaliana]
gi|3913518|sp|Q42546|DPNP_ARATH 3'(2'),5'-bisphosphate
nucleotidase (3'(2'),5-bisphosphonucleoside
3'(2')-phosphohydrolase) (DPNPase)
gi|1103921|gb|AAC49263.1| 3'(2'),5'-bisphosphate
nucleotidase gi|8777311|dbj|BAA96901.1|
3'(2'),5'-bisphosphate nucleotidase [Arabidopsis
thaliana] gi|15281148|gb|AAK58887.1| inositol
polyphosphate 1-phosphatase FIERY1 [Arabidopsis
thaliana] gi|29029098|gb|AAO64928.1| At5g63980
[Arabidopsis thaliana]
Length = 353
Score = 69.7 bits (169), Expect = 8e-12
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -3
Query: 317 VFMKFARAGQKEKIWDHAAGVIIIQEAGGMVTDAGGDPLDFTNGSCLEGLDRGIV 153
++++F G +EKIWDH AG I++ EAGG+VTDA G PLDF+ G L+ LD GI+
Sbjct: 273 IYLRFPHKGYREKIWDHVAGAIVVTEAGGIVTDAAGKPLDFSKGKYLD-LDTGII 326
>sp|Q40639|DPNP_ORYSA 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (3'(2'),5-BISPHOSPHONUCLEOSIDE
3'(2')-PHOSPHOHYDROLASE) (DPNPASE)
gi|7489522|pir||T03305 probable 3'(2'),5'-bisphosphate
nucleotidase (EC 3.1.3.7) - rice
gi|1109672|gb|AAC49121.1| 3'(2'),5-diphosphonucleoside
3'(2') phosphohydrolase gi|1586671|prf||2204308A
diphosphonucleoside phosphohydrolase
Length = 358
Score = 69.7 bits (169), Expect = 8e-12
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -3
Query: 317 VFMKFARAGQKEKIWDHAAGVIIIQEAGGMVTDAGGDPLDFTNGSCLEGLDRGIVA 150
++++F G +EKIWDHAAG I++ EAGG+VTDA G+ LDF+ G L+ LD GI+A
Sbjct: 277 IYLRFPHKGYREKIWDHAAGSIVVTEAGGLVTDASGNDLDFSKGRFLD-LDTGIIA 331
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 343,423,008
Number of Sequences: 1393205
Number of extensions: 7363697
Number of successful extensions: 20812
Number of sequences better than 10.0: 259
Number of HSP's better than 10.0 without gapping: 19487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20626
length of database: 448,689,247
effective HSP length: 108
effective length of database: 298,223,107
effective search space used: 7157354568
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
