Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004180A_C01 KMC004180A_c01
(621 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194245.1| acid phosphatase - like protein; protein id: At... 78 8e-14
ref|NP_194656.1| acid phosphatase-like protein; protein id: At4g... 77 2e-13
ref|NP_194655.1| acid phosphatase-like protein; protein id: At4g... 73 3e-12
ref|NP_199939.1| acid phosphatase; protein id: At5g51260.1 [Arab... 73 3e-12
emb|CAA39369.1| APS-AA2 [Lycopersicon esculentum] 71 1e-11
>ref|NP_194245.1| acid phosphatase - like protein; protein id: At4g25150.1, supported
by cDNA: gi_20259050 [Arabidopsis thaliana]
gi|7435102|pir||T05536 acid phosphatase (EC 3.1.3.2) -
Arabidopsis thaliana gi|4455258|emb|CAB36757.1| acid
phosphatase-like protein [Arabidopsis thaliana]
gi|7269365|emb|CAB79424.1| acid phosphatase-like protein
[Arabidopsis thaliana] gi|18389260|gb|AAL67073.1|
putative acid phosphatase [Arabidopsis thaliana]
gi|20259051|gb|AAM14241.1| putative acid phosphatase
[Arabidopsis thaliana]
Length = 260
Score = 78.2 bits (191), Expect = 8e-14
Identities = 35/45 (77%), Positives = 39/45 (85%)
Frame = -1
Query: 621 KSEKRAELVNAGYRIHGNSGDQWSDLWGNAVASRSFKLPNPMYYI 487
KSEKR E+V GYRI GNSGDQWSDL G+A++ RSFKLPNPMYYI
Sbjct: 215 KSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYI 259
>ref|NP_194656.1| acid phosphatase-like protein; protein id: At4g29270.1, supported
by cDNA: 108301. [Arabidopsis thaliana]
gi|7435100|pir||T13440 acid phosphatase homolog
T17A13.90 - Arabidopsis thaliana
gi|7269825|emb|CAB79685.1| acid phosphatase-like protein
[Arabidopsis thaliana] gi|21536678|gb|AAM61010.1| acid
phosphatase-like protein [Arabidopsis thaliana]
gi|28466939|gb|AAO44078.1| At4g29270 [Arabidopsis
thaliana]
Length = 256
Score = 76.6 bits (187), Expect = 2e-13
Identities = 33/46 (71%), Positives = 41/46 (88%)
Frame = -1
Query: 621 KSEKRAELVNAGYRIHGNSGDQWSDLWGNAVASRSFKLPNPMYYIS 484
KSE+R+++V GY IHGN+GDQWSDL G AVASRSFK+PNPMYY++
Sbjct: 211 KSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA 256
>ref|NP_194655.1| acid phosphatase-like protein; protein id: At4g29260.1, supported
by cDNA: gi_15293022, supported by cDNA: gi_20258884
[Arabidopsis thaliana] gi|7435101|pir||T13437 acid
phosphatase homolog T17A13.80 - Arabidopsis thaliana
gi|7269824|emb|CAB79684.1| acid phosphatase-like protein
[Arabidopsis thaliana] gi|15293023|gb|AAK93622.1|
putative acid phosphatase [Arabidopsis thaliana]
gi|20258885|gb|AAM14114.1| putative acid phosphatase
[Arabidopsis thaliana]
Length = 255
Score = 73.2 bits (178), Expect = 3e-12
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = -1
Query: 621 KSEKRAELVNAGYRIHGNSGDQWSDLWGNAVASRSFKLPNPMYYI 487
KSE+R++L+ G++I GNSGDQWSDL G AVA RSFK+PNPMYYI
Sbjct: 210 KSEQRSKLIEEGFKIRGNSGDQWSDLQGFAVADRSFKVPNPMYYI 254
>ref|NP_199939.1| acid phosphatase; protein id: At5g51260.1 [Arabidopsis thaliana]
gi|8843863|dbj|BAA97389.1| acid phosphatase [Arabidopsis
thaliana]
Length = 257
Score = 73.2 bits (178), Expect = 3e-12
Identities = 33/45 (73%), Positives = 37/45 (81%)
Frame = -1
Query: 621 KSEKRAELVNAGYRIHGNSGDQWSDLWGNAVASRSFKLPNPMYYI 487
KSEKR E+V GYRI GNSGDQWSDL G +++ RSFKL NPMYYI
Sbjct: 212 KSEKRDEMVKEGYRIRGNSGDQWSDLLGTSMSQRSFKLANPMYYI 256
>emb|CAA39369.1| APS-AA2 [Lycopersicon esculentum]
Length = 120
Score = 71.2 bits (173), Expect = 1e-11
Identities = 33/45 (73%), Positives = 37/45 (81%)
Frame = -1
Query: 621 KSEKRAELVNAGYRIHGNSGDQWSDLWGNAVASRSFKLPNPMYYI 487
KSEKR E+V G RI GNSGDQWSDL G++ + RSFKLPNPMYYI
Sbjct: 75 KSEKRNEMVEDGLRIAGNSGDQWSDLLGSSASIRSFKLPNPMYYI 119
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,778,900
Number of Sequences: 1393205
Number of extensions: 12921560
Number of successful extensions: 35590
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 33923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35517
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25017613016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
