Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004176A_C01 KMC004176A_c01
(644 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180843.1| unknown protein; protein id: At2g32840.1 [Arabi... 67 3e-10
dbj|BAC42211.1| unknown protein [Arabidopsis thaliana] gi|288275... 67 3e-10
ref|NP_563722.1| expressed protein; protein id: At1g04930.1, sup... 54 2e-06
gb|AAM20663.1| unknown protein [Arabidopsis thaliana] gi|2213647... 54 2e-06
ref|NP_724039.1| Gustatory receptor 36b CG31744-PA gi|22946699|g... 32 5.6
>ref|NP_180843.1| unknown protein; protein id: At2g32840.1 [Arabidopsis thaliana]
gi|7487298|pir||T01123 hypothetical protein At2g32840
[imported] - Arabidopsis thaliana
gi|2702278|gb|AAB91981.1| hypothetical protein
[Arabidopsis thaliana] gi|20197061|gb|AAM14901.1|
hypothetical protein [Arabidopsis thaliana]
Length = 346
Score = 66.6 bits (161), Expect = 3e-10
Identities = 34/46 (73%), Positives = 38/46 (81%)
Frame = -3
Query: 636 DLFKRHIKRAKGVRARLREERLQRIKRYRSRLRLLLPPPVEQFRND 499
DL KRHI RAK VRARLREERL+RI RY++RL LLLPP EQ RN+
Sbjct: 301 DLLKRHIDRAKKVRARLREERLKRIARYKARLALLLPPFGEQCRNE 346
>dbj|BAC42211.1| unknown protein [Arabidopsis thaliana] gi|28827576|gb|AAO50632.1|
unknown protein [Arabidopsis thaliana]
Length = 337
Score = 66.6 bits (161), Expect = 3e-10
Identities = 34/46 (73%), Positives = 38/46 (81%)
Frame = -3
Query: 636 DLFKRHIKRAKGVRARLREERLQRIKRYRSRLRLLLPPPVEQFRND 499
DL KRHI RAK VRARLREERL+RI RY++RL LLLPP EQ RN+
Sbjct: 292 DLLKRHIDRAKKVRARLREERLKRIARYKARLALLLPPFGEQCRNE 337
>ref|NP_563722.1| expressed protein; protein id: At1g04930.1, supported by cDNA:
154031. [Arabidopsis thaliana] gi|25372785|pir||G86182
hypothetical protein [imported] - Arabidopsis thaliana
gi|7211973|gb|AAF40444.1|AC004809_2 Contains similarity
to the CREB-binding protein (CBP) from Mus sp gb|S66385.
[Arabidopsis thaliana] gi|21553623|gb|AAM62716.1|
unknown [Arabidopsis thaliana]
Length = 332
Score = 53.9 bits (128), Expect = 2e-06
Identities = 25/37 (67%), Positives = 32/37 (85%)
Frame = -3
Query: 639 KDLFKRHIKRAKGVRARLREERLQRIKRYRSRLRLLL 529
KDL KRHI+RAK VRA+LREER +RI+RY+ R+ L+L
Sbjct: 290 KDLLKRHIERAKKVRAQLREERSRRIRRYKERITLIL 326
>gb|AAM20663.1| unknown protein [Arabidopsis thaliana] gi|22136470|gb|AAM91313.1|
unknown protein [Arabidopsis thaliana]
Length = 192
Score = 53.9 bits (128), Expect = 2e-06
Identities = 25/37 (67%), Positives = 32/37 (85%)
Frame = -3
Query: 639 KDLFKRHIKRAKGVRARLREERLQRIKRYRSRLRLLL 529
KDL KRHI+RAK VRA+LREER +RI+RY+ R+ L+L
Sbjct: 150 KDLLKRHIERAKKVRAQLREERSRRIRRYKERITLIL 186
>ref|NP_724039.1| Gustatory receptor 36b CG31744-PA gi|22946699|gb|AAF53597.2|
CG31744-PA [Drosophila melanogaster]
Length = 391
Score = 32.3 bits (72), Expect = 5.6
Identities = 17/61 (27%), Positives = 29/61 (46%)
Frame = +2
Query: 245 WLTGISNLLYSFKPLPIYRSDVRYCRIYIEKLNIHIHFQLYFYIGYHGEGTFLFKETQTI 424
+L G+SN + + +++S R C IY NI I + + HG+ LF+ +
Sbjct: 17 YLIGLSNFEFDCRTGRVFKS--RRCTIYAFMANIFILITIIYNFTAHGDTNLLFQSANKL 74
Query: 425 H 427
H
Sbjct: 75 H 75
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 527,671,627
Number of Sequences: 1393205
Number of extensions: 11387866
Number of successful extensions: 34033
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 31726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33995
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
