Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004163A_C01 KMC004163A_c01
(969 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB76907.3| alpha-fucosidase [Cicer arietinum] 290 3e-77
emb|CAA09607.1| profucosidase [Pisum sativum] 283 2e-75
pir||S49578 trypsin inhibitor homolog - garden pea 276 3e-73
emb|CAA57931.1| alpha-fucosidase [Pisum sativum] 276 3e-73
pir||S65830 alpha fucosidase precursor - garden pea 274 1e-72
>emb|CAB76907.3| alpha-fucosidase [Cicer arietinum]
Length = 215
Score = 290 bits (741), Expect = 3e-77
Identities = 139/207 (67%), Positives = 164/207 (79%)
Frame = -1
Query: 951 LLAFISTKLPTAFSSNDVEQVLDVNGDSIFPGGRYYIRPAIRGPPGGGVRLGKTGDSDCP 772
LL L AFS+ DVEQVLD+NG+ IFPGG+YYI PAIRGPPGGGVRL KTGDS+CP
Sbjct: 10 LLFVFLLNLSLAFSNEDVEQVLDINGNPIFPGGKYYILPAIRGPPGGGVRLDKTGDSECP 69
Query: 771 VTALQEYSEVKNGIPVRFRIAAEVSTGIIFTGTELDIEFTVKPHCVESPKWIVFVDNEIG 592
VT LQ+Y EV NG+PV+F I +S GIIFTGT ++IEFT KP+C ES KW++FVD+ I
Sbjct: 70 VTVLQDYKEVINGLPVKFVIPG-ISPGIIFTGTPIEIEFTKKPNCAESSKWLIFVDDTID 128
Query: 591 KACVGIGGAKDHPGKQTFSGTFNIQKNSAGFGYKLVFCIKGSPTCLDIGRYDNGEGGRRL 412
KAC+GIGG +++ GKQT SGTFNIQK +GFGYKL FC+KGSP CLDIGRYDN EGGRRL
Sbjct: 129 KACIGIGGPENYSGKQTLSGTFNIQKYGSGFGYKLGFCVKGSPICLDIGRYDNDEGGRRL 188
Query: 411 NLTEHEAFDLVFVPVGVADSAGIRSVV 331
NLTEHEAF +VFV + ++SVV
Sbjct: 189 NLTEHEAFRVVFVDASSYEDGIVKSVV 215
>emb|CAA09607.1| profucosidase [Pisum sativum]
Length = 217
Score = 283 bits (725), Expect = 2e-75
Identities = 139/207 (67%), Positives = 165/207 (79%)
Frame = -1
Query: 951 LLAFISTKLPTAFSSNDVEQVLDVNGDSIFPGGRYYIRPAIRGPPGGGVRLGKTGDSDCP 772
L FI+T L AFS+ DVEQVLDVNG IFPGG+YYI PAIRGPPGGGVRLG+TGD CP
Sbjct: 13 LFVFITT-LSLAFSNEDVEQVLDVNGKPIFPGGQYYILPAIRGPPGGGVRLGRTGDLTCP 71
Query: 771 VTALQEYSEVKNGIPVRFRIAAEVSTGIIFTGTELDIEFTVKPHCVESPKWIVFVDNEIG 592
VT LQ+ EVKNG+PV+F I +S GIIFTGT ++IE+T KP+C +S KW+VFVDN I
Sbjct: 72 VTVLQDRREVKNGLPVKFVIPG-ISPGIIFTGTPIEIEYTKKPNCAKSSKWLVFVDNVIQ 130
Query: 591 KACVGIGGAKDHPGKQTFSGTFNIQKNSAGFGYKLVFCIKGSPTCLDIGRYDNGEGGRRL 412
KACVGIGG +++PG QT SG F I+K+ +GFGYKL FCIKGSPTCLD+GR+DN E GRRL
Sbjct: 131 KACVGIGGPENYPGIQTLSGLFKIEKHESGFGYKLGFCIKGSPTCLDVGRFDNDEAGRRL 190
Query: 411 NLTEHEAFDLVFVPVGVADSAGIRSVV 331
NLTEHE+F +VFV D+ I+SVV
Sbjct: 191 NLTEHESFQVVFVEAEANDAEFIKSVV 217
>pir||S49578 trypsin inhibitor homolog - garden pea
Length = 217
Score = 276 bits (707), Expect = 3e-73
Identities = 135/216 (62%), Positives = 165/216 (75%), Gaps = 5/216 (2%)
Frame = -1
Query: 963 PLLPL-----LAFISTKLPTAFSSNDVEQVLDVNGDSIFPGGRYYIRPAIRGPPGGGVRL 799
PL PL L T L AFS+ DVEQVLD+NG+ IFPG +Y+I PAIRGPPGGGVRL
Sbjct: 3 PLSPLTLSFFLFVFITNLSLAFSNEDVEQVLDINGNPIFPGVQYFILPAIRGPPGGGVRL 62
Query: 798 GKTGDSDCPVTALQEYSEVKNGIPVRFRIAAEVSTGIIFTGTELDIEFTVKPHCVESPKW 619
G+TGD CPVT LQ+ EVK G+PV+F + E+S GIIFTGT ++IE+ KP+C +S KW
Sbjct: 63 GRTGDLTCPVTVLQDRQEVKYGLPVKF-VIPEISPGIIFTGTPIEIEYAKKPNCAKSSKW 121
Query: 618 IVFVDNEIGKACVGIGGAKDHPGKQTFSGTFNIQKNSAGFGYKLVFCIKGSPTCLDIGRY 439
+VFVDN I KACVGIGG +++PG QT SG F I+K+ +GFGYKL FCIKGSPTCLD+GR+
Sbjct: 122 LVFVDNVIQKACVGIGGPENYPGVQTLSGLFKIEKHESGFGYKLGFCIKGSPTCLDVGRF 181
Query: 438 DNGEGGRRLNLTEHEAFDLVFVPVGVADSAGIRSVV 331
DN E GRRLNLTEHE+F +VF+ D+ I+SVV
Sbjct: 182 DNDENGRRLNLTEHESFQVVFIQAEANDAEFIKSVV 217
>emb|CAA57931.1| alpha-fucosidase [Pisum sativum]
Length = 217
Score = 276 bits (706), Expect = 3e-73
Identities = 135/216 (62%), Positives = 165/216 (75%), Gaps = 5/216 (2%)
Frame = -1
Query: 963 PLLPL-----LAFISTKLPTAFSSNDVEQVLDVNGDSIFPGGRYYIRPAIRGPPGGGVRL 799
PL PL L T L AFS+ DVEQVLD NG+ IFPG +Y+I PAIRGP GGGVRL
Sbjct: 3 PLSPLTLSFFLFVFITNLSLAFSNEDVEQVLDFNGNPIFPGVQYFILPAIRGPAGGGVRL 62
Query: 798 GKTGDSDCPVTALQEYSEVKNGIPVRFRIAAEVSTGIIFTGTELDIEFTVKPHCVESPKW 619
G+TGD CPVT LQ+ EVKNG+PV+F + E+S GIIFTGT ++IE+T KP+C +S KW
Sbjct: 63 GRTGDLTCPVTVLQDRQEVKNGLPVKF-VIPEISPGIIFTGTPIEIEYTKKPNCAKSSKW 121
Query: 618 IVFVDNEIGKACVGIGGAKDHPGKQTFSGTFNIQKNSAGFGYKLVFCIKGSPTCLDIGRY 439
+VFVDN I KACVGIGG +++PG QT SG F I+K+ +GFGYKL FC+KGSPTCLD+GR+
Sbjct: 122 LVFVDNVIQKACVGIGGPENYPGVQTLSGLFKIEKHESGFGYKLGFCVKGSPTCLDVGRF 181
Query: 438 DNGEGGRRLNLTEHEAFDLVFVPVGVADSAGIRSVV 331
DN E GRRLNLTEHE+F +VF+ D+ I+SVV
Sbjct: 182 DNDEDGRRLNLTEHESFQVVFIQAEANDAEFIKSVV 217
>pir||S65830 alpha fucosidase precursor - garden pea
Length = 217
Score = 274 bits (701), Expect = 1e-72
Identities = 135/216 (62%), Positives = 164/216 (75%), Gaps = 5/216 (2%)
Frame = -1
Query: 963 PLLPL-----LAFISTKLPTAFSSNDVEQVLDVNGDSIFPGGRYYIRPAIRGPPGGGVRL 799
PL PL L T L AFS+ DVEQVLD+NG+ IFPGG+YYI PAIRGPPGGGVRL
Sbjct: 3 PLSPLTLSFFLFVFITNLSLAFSNEDVEQVLDINGNPIFPGGQYYILPAIRGPPGGGVRL 62
Query: 798 GKTGDSDCPVTALQEYSEVKNGIPVRFRIAAEVSTGIIFTGTELDIEFTVKPHCVESPKW 619
G+TGD CPVT LQ+ EVK G+PV+F + E+S GIIFTGT ++IE+ KP+C +S KW
Sbjct: 63 GRTGDLTCPVTVLQDRQEVKYGLPVKF-VIPEISPGIIFTGTPIEIEYAKKPNCAKSSKW 121
Query: 618 IVFVDNEIGKACVGIGGAKDHPGKQTFSGTFNIQKNSAGFGYKLVFCIKGSPTCLDIGRY 439
+VFVDN I KA VGIGG +++PG QT SG F I+K+ +GFGYKL FCIKGSPTCL +GR+
Sbjct: 122 LVFVDNLIEKAYVGIGGPENYPGVQTLSGLFKIEKHESGFGYKLGFCIKGSPTCLGVGRF 181
Query: 438 DNGEGGRRLNLTEHEAFDLVFVPVGVADSAGIRSVV 331
DN E GRRLNLTEHE+F +VF+ D+ I+SVV
Sbjct: 182 DNDENGRRLNLTEHESFQVVFIQAEANDAEFIKSVV 217
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 855,659,328
Number of Sequences: 1393205
Number of extensions: 20156231
Number of successful extensions: 60835
Number of sequences better than 10.0: 228
Number of HSP's better than 10.0 without gapping: 55266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60374
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 55187681368
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
