Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004144A_C01 KMC004144A_c01
(676 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD11426.1| cytoplasmic glucose-6-phosphate 1-dehydrogenase [... 184 1e-45
ref|NP_198892.1| glucose-6-phosphate dehydrogenase; protein id: ... 181 6e-45
pir||T52610 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) [i... 181 6e-45
sp|Q42919|G6PD_MEDSA Glucose-6-phosphate 1-dehydrogenase, cytopl... 181 1e-44
sp|P37830|G6PD_SOLTU Glucose-6-phosphate 1-dehydrogenase, cytopl... 179 3e-44
>gb|AAD11426.1| cytoplasmic glucose-6-phosphate 1-dehydrogenase [Mesembryanthemum
crystallinum]
Length = 516
Score = 184 bits (467), Expect = 1e-45
Identities = 90/99 (90%), Positives = 92/99 (92%)
Frame = -3
Query: 674 QSELDLSYRQRYQGVTIPEAYERLILDTIKGDQQHFVRRDELKASWEIFTPLLHSIDKGE 495
QSELDLSY QRYQGV IPEAYERLILDTIKGDQQHFVRRDELKA+WEIFTPLLH IDKGE
Sbjct: 419 QSELDLSYGQRYQGVVIPEAYERLILDTIKGDQQHFVRRDELKAAWEIFTPLLHRIDKGE 478
Query: 494 FKSIPYQPGTRGPAEADELLLEKAGYVQTHGYIWIPPTL 378
FK I Y+PGTRGPAEADE LL KAGYVQTHGYIWIPPTL
Sbjct: 479 FKPISYKPGTRGPAEADE-LLAKAGYVQTHGYIWIPPTL 516
>ref|NP_198892.1| glucose-6-phosphate dehydrogenase; protein id: At5g40760.1
[Arabidopsis thaliana] gi|25452979|sp|Q9FJI5|GPD6_ARATH
Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform
2 (G6PD6) (G6PDH6) gi|9758370|dbj|BAB08837.1|
glucose-6-phosphate dehydrogenase [Arabidopsis thaliana]
gi|28416697|gb|AAO42879.1| At5g40760 [Arabidopsis
thaliana]
Length = 515
Score = 181 bits (460), Expect = 6e-45
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = -3
Query: 674 QSELDLSYRQRYQGVTIPEAYERLILDTIKGDQQHFVRRDELKASWEIFTPLLHSIDKGE 495
QSELDLSY QRYQGV IPEAYERLILDTIKGDQQHFVRRDELK +WEIFTPLLH IDKGE
Sbjct: 418 QSELDLSYGQRYQGVAIPEAYERLILDTIKGDQQHFVRRDELKVAWEIFTPLLHRIDKGE 477
Query: 494 FKSIPYQPGTRGPAEADELLLEKAGYVQTHGYIWIPPTL 378
KSIPY+PG+RGP EAD+ LLEKAGY+QTHGYIWIPPTL
Sbjct: 478 VKSIPYKPGSRGPKEADQ-LLEKAGYLQTHGYIWIPPTL 515
>pir||T52610 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) [imported] -
Arabidopsis thaliana gi|5732197|emb|CAB52675.1|
glucose-6-phosphate 1-dehydrogenase [Arabidopsis
thaliana]
Length = 515
Score = 181 bits (460), Expect = 6e-45
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = -3
Query: 674 QSELDLSYRQRYQGVTIPEAYERLILDTIKGDQQHFVRRDELKASWEIFTPLLHSIDKGE 495
QSELDLSY QRYQGV IPEAYERLILDTIKGDQQHFVRRDELK +WEIFTPLLH IDKGE
Sbjct: 418 QSELDLSYGQRYQGVAIPEAYERLILDTIKGDQQHFVRRDELKVAWEIFTPLLHRIDKGE 477
Query: 494 FKSIPYQPGTRGPAEADELLLEKAGYVQTHGYIWIPPTL 378
KSIPY+PG+RGP EAD+ LLEKAGY+QTHGYIWIPPTL
Sbjct: 478 VKSIPYKPGSRGPKEADQ-LLEKAGYLQTHGYIWIPPTL 515
>sp|Q42919|G6PD_MEDSA Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD)
gi|1362053|pir||S57785 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49) - alfalfa
gi|603219|gb|AAB41552.1| glucose-6-phosphate
dehydrogenase
Length = 515
Score = 181 bits (458), Expect = 1e-44
Identities = 86/99 (86%), Positives = 92/99 (92%)
Frame = -3
Query: 674 QSELDLSYRQRYQGVTIPEAYERLILDTIKGDQQHFVRRDELKASWEIFTPLLHSIDKGE 495
QSELDLSY QRYQG+TIPEAYERLILDTI+GDQQHFVRRDELKASW+IFTPLLH ID+GE
Sbjct: 418 QSELDLSYGQRYQGITIPEAYERLILDTIRGDQQHFVRRDELKASWQIFTPLLHKIDRGE 477
Query: 494 FKSIPYQPGTRGPAEADELLLEKAGYVQTHGYIWIPPTL 378
K +PY PG+RGPAEADE LLEKAGYVQT GYIWIPPTL
Sbjct: 478 LKPVPYNPGSRGPAEADE-LLEKAGYVQTPGYIWIPPTL 515
>sp|P37830|G6PD_SOLTU Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD)
gi|2129985|pir||S60287 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49) - potato
gi|471345|emb|CAA52442.1| glucose-6-phosphate
1-dehydrogenase [Solanum tuberosum]
Length = 511
Score = 179 bits (454), Expect = 3e-44
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = -3
Query: 674 QSELDLSYRQRYQGVTIPEAYERLILDTIKGDQQHFVRRDELKASWEIFTPLLHSIDKGE 495
QSELDLSY QRYQGV IPEAYERLILDTI+GDQQHFVRRDELKA+WEIFTPLLH ID GE
Sbjct: 414 QSELDLSYGQRYQGVVIPEAYERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHRIDNGE 473
Query: 494 FKSIPYQPGTRGPAEADELLLEKAGYVQTHGYIWIPPTL 378
K IPY+PG+RGPAEADE LL+ AGYVQTHGYIWIPPTL
Sbjct: 474 VKPIPYKPGSRGPAEADE-LLQNAGYVQTHGYIWIPPTL 511
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,096,270
Number of Sequences: 1393205
Number of extensions: 11049619
Number of successful extensions: 23902
Number of sequences better than 10.0: 274
Number of HSP's better than 10.0 without gapping: 23061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23835
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29704274460
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
