Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004024A_C01 KMC004024A_c01
(503 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO18457.1| putative Hsp70 binding protein [Oryza sativa (jap... 135 3e-31
gb|AAM63079.1| unknown [Arabidopsis thaliana] 120 7e-27
ref|NP_566349.1| expressed protein; protein id: At3g09350.1, sup... 120 7e-27
gb|AAF14032.1|AC011436_16 hypothetical protein [Arabidopsis thal... 120 7e-27
dbj|BAC41871.1| unknown protein [Arabidopsis thaliana] 103 1e-21
>gb|AAO18457.1| putative Hsp70 binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 379
Score = 135 bits (339), Expect = 3e-31
Identities = 69/111 (62%), Positives = 83/111 (74%), Gaps = 5/111 (4%)
Frame = -2
Query: 481 DTEKMKQLLQERINSISLLSEEDLGASR*ERQLVDSLWVTCFNEPSSLREKGLLVLPGED 302
D +K+K +L+ RI IS + +DL A R ERQLVDSLW C+NEPSSLREKGL+VLPGED
Sbjct: 269 DQDKLKDVLKSRIEGISTMDADDLSAHREERQLVDSLWKECYNEPSSLREKGLVVLPGED 328
Query: 301 A---PPPDVASKHFEPPLRSWASSNQSSKKESDNE--KKDAPLLLGLGPSS 164
A PPPDV FEPPLR+WA+S K++S++E KKD PLLLG GPSS
Sbjct: 329 APQQPPPDVVGSMFEPPLRAWAASRPPPKEDSESESAKKDPPLLLGPGPSS 379
>gb|AAM63079.1| unknown [Arabidopsis thaliana]
Length = 363
Score = 120 bits (302), Expect = 7e-27
Identities = 64/102 (62%), Positives = 79/102 (76%)
Frame = -2
Query: 475 EKMKQLLQERINSISLLSEEDLGASR*ERQLVDSLWVTCFNEPSSLREKGLLVLPGEDAP 296
EK++QLL+ERI I+L+S+EDL + ERQLVD LW C+NEPSSLREKGL+VLPGEDA
Sbjct: 269 EKLRQLLEERIKGITLMSQEDLETVKEERQLVDLLWSICYNEPSSLREKGLVVLPGEDAL 328
Query: 295 PPDVASKHFEPPLRSWASSNQSSKKESDNEKKDAPLLLGLGP 170
PPDVASK FEPPLR+ A++ ++ EKKD P+ L LGP
Sbjct: 329 PPDVASKLFEPPLRASAANRNAT------EKKDEPMKL-LGP 363
>ref|NP_566349.1| expressed protein; protein id: At3g09350.1, supported by cDNA:
19154. [Arabidopsis thaliana] gi|28393837|gb|AAO42326.1|
unknown protein [Arabidopsis thaliana]
gi|28973369|gb|AAO64009.1| unknown protein [Arabidopsis
thaliana]
Length = 363
Score = 120 bits (302), Expect = 7e-27
Identities = 64/102 (62%), Positives = 79/102 (76%)
Frame = -2
Query: 475 EKMKQLLQERINSISLLSEEDLGASR*ERQLVDSLWVTCFNEPSSLREKGLLVLPGEDAP 296
EK++QLL+ERI I+L+S+EDL + ERQLVD LW C+NEPSSLREKGL+VLPGEDA
Sbjct: 269 EKLRQLLEERIKGITLMSQEDLETVKEERQLVDLLWSICYNEPSSLREKGLVVLPGEDAL 328
Query: 295 PPDVASKHFEPPLRSWASSNQSSKKESDNEKKDAPLLLGLGP 170
PPDVASK FEPPLR+ A++ ++ EKKD P+ L LGP
Sbjct: 329 PPDVASKLFEPPLRASAANRNAT------EKKDEPMKL-LGP 363
>gb|AAF14032.1|AC011436_16 hypothetical protein [Arabidopsis thaliana]
Length = 387
Score = 120 bits (302), Expect = 7e-27
Identities = 64/102 (62%), Positives = 79/102 (76%)
Frame = -2
Query: 475 EKMKQLLQERINSISLLSEEDLGASR*ERQLVDSLWVTCFNEPSSLREKGLLVLPGEDAP 296
EK++QLL+ERI I+L+S+EDL + ERQLVD LW C+NEPSSLREKGL+VLPGEDA
Sbjct: 293 EKLRQLLEERIKGITLMSQEDLETVKEERQLVDLLWSICYNEPSSLREKGLVVLPGEDAL 352
Query: 295 PPDVASKHFEPPLRSWASSNQSSKKESDNEKKDAPLLLGLGP 170
PPDVASK FEPPLR+ A++ ++ EKKD P+ L LGP
Sbjct: 353 PPDVASKLFEPPLRASAANRNAT------EKKDEPMKL-LGP 387
>dbj|BAC41871.1| unknown protein [Arabidopsis thaliana]
Length = 362
Score = 103 bits (256), Expect = 1e-21
Identities = 50/100 (50%), Positives = 68/100 (68%)
Frame = -2
Query: 469 MKQLLQERINSISLLSEEDLGASR*ERQLVDSLWVTCFNEPSSLREKGLLVLPGEDAPPP 290
++QLL+ER I ++S+EDL A+R ERQLVDSLW C++EPS LRE+GL+ LP +D P
Sbjct: 268 LRQLLEERTRRIIVMSDEDLCAAREERQLVDSLWTVCYDEPSLLRERGLVYLPSDDELAP 327
Query: 289 DVASKHFEPPLRSWASSNQSSKKESDNEKKDAPLLLGLGP 170
DV FEPPLR+WA +++ + + PLLLG P
Sbjct: 328 DVVRDRFEPPLRAWA-----ARRHDETSESPVPLLLGPAP 362
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,300,616
Number of Sequences: 1393205
Number of extensions: 8294174
Number of successful extensions: 29173
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 27743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29137
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
