Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004011A_C02 KMC004011A_c02
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T50645 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) [im... 110 2e-35
gb|AAK58515.1|AF249675_1 beta-1,3-glucanase-like protein [Olea e... 82 5e-22
ref|NP_191103.1| glycosyl hydrolase family 17 (beta-1,3-glucanas... 84 7e-20
gb|AAK76666.1| putative beta-1,3-glucanase [Arabidopsis thaliana] 84 7e-20
gb|AAM66982.1| beta-1,3-glucanase-like protein [Arabidopsis thal... 84 7e-20
>pir||T50645 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) [imported] -
garden pea gi|7414433|emb|CAB85903.1| beta-1,3 glucanase
[Pisum sativum]
Length = 453
Score = 110 bits (276), Expect(2) = 2e-35
Identities = 50/69 (72%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
Frame = -3
Query: 546 GGG---VPIPAAGGRKWCVPKADASNQALQANINYVCSQNVDCKPIQPGGTCFAPNDVRA 376
GGG P P GG+KWCVPKADAS ALQANINYVCSQ +DC+PIQPGG C+A N+V+A
Sbjct: 354 GGGKMPTPRPVVGGQKWCVPKADASPGALQANINYVCSQGIDCRPIQPGGVCYAANNVKA 413
Query: 375 LATYAMNAY 349
+ATYAMNAY
Sbjct: 414 IATYAMNAY 422
Score = 60.1 bits (144), Expect(2) = 2e-35
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -1
Query: 344 QANGRHDYNCDFSHTAVITSTNPSHGNCRI 255
QANG+HDYNCDFSH+ V TS NPSH NCRI
Sbjct: 424 QANGKHDYNCDFSHSGVTTSVNPSHDNCRI 453
>gb|AAK58515.1|AF249675_1 beta-1,3-glucanase-like protein [Olea europaea]
Length = 460
Score = 81.6 bits (200), Expect(2) = 5e-22
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3
Query: 534 PIPAAGGRKWCVPKADASNQALQANINYVCSQNVDCKPIQPGGTCFAPNDVRALATYAMN 355
P P A G WCVPK S+ L NINY C Q +DC PIQPGG CF PN V+A A Y MN
Sbjct: 364 PTPKAAG-SWCVPKPGVSDDQLTGNINYACGQGIDCGPIQPGGACFEPNTVKAHAAYVMN 422
Query: 354 AY 349
Y
Sbjct: 423 LY 424
Score = 44.3 bits (103), Expect(2) = 5e-22
Identities = 17/28 (60%), Positives = 23/28 (81%)
Frame = -1
Query: 344 QANGRHDYNCDFSHTAVITSTNPSHGNC 261
Q+ GR+ +NCDFS TA +T+TNPS+G C
Sbjct: 426 QSAGRNSWNCDFSQTATLTNTNPSYGAC 453
>ref|NP_191103.1| glycosyl hydrolase family 17 (beta-1,3-glucanase); protein id:
At3g55430.1, supported by cDNA: 8980., supported by
cDNA: gi_15028378 [Arabidopsis thaliana]
gi|11279329|pir||T47682 beta-1,3-glucanase-like protein
- Arabidopsis thaliana gi|7076786|emb|CAB75901.1|
beta-1, 3-glucanase-like protein [Arabidopsis thaliana]
gi|23297293|gb|AAN12934.1| putative beta-1,3-glucanase
[Arabidopsis thaliana]
Length = 449
Score = 84.0 bits (206), Expect(2) = 7e-20
Identities = 37/69 (53%), Positives = 49/69 (70%), Gaps = 3/69 (4%)
Frame = -3
Query: 546 GGG---VPIPAAGGRKWCVPKADASNQALQANINYVCSQNVDCKPIQPGGTCFAPNDVRA 376
GGG +P P+ G KWCV ++ A+N LQ +IN+VC Q VDCKPIQ GG+CF P+ +R
Sbjct: 350 GGGRPALPAPSTAGGKWCVARSGATNTQLQDSINWVCGQGVDCKPIQAGGSCFNPSSLRT 409
Query: 375 LATYAMNAY 349
A++ MNAY
Sbjct: 410 HASFVMNAY 418
Score = 34.7 bits (78), Expect(2) = 7e-20
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 344 QANGRHDYNCDFSHTAVITSTNPSHGNCR 258
Q++GR D C+FS T +I NPS+G C+
Sbjct: 420 QSHGRTDGACNFSGTGMIVGNNPSNGACK 448
>gb|AAK76666.1| putative beta-1,3-glucanase [Arabidopsis thaliana]
Length = 449
Score = 84.0 bits (206), Expect(2) = 7e-20
Identities = 37/69 (53%), Positives = 49/69 (70%), Gaps = 3/69 (4%)
Frame = -3
Query: 546 GGG---VPIPAAGGRKWCVPKADASNQALQANINYVCSQNVDCKPIQPGGTCFAPNDVRA 376
GGG +P P+ G KWCV ++ A+N LQ +IN+VC Q VDCKPIQ GG+CF P+ +R
Sbjct: 350 GGGRPALPAPSTAGGKWCVARSGATNTQLQDSINWVCGQGVDCKPIQAGGSCFNPSSLRT 409
Query: 375 LATYAMNAY 349
A++ MNAY
Sbjct: 410 HASFVMNAY 418
Score = 34.7 bits (78), Expect(2) = 7e-20
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 344 QANGRHDYNCDFSHTAVITSTNPSHGNCR 258
Q++GR D C+FS T +I NPS+G C+
Sbjct: 420 QSHGRTDGACNFSGTGMIVGNNPSNGACK 448
>gb|AAM66982.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana]
Length = 449
Score = 84.0 bits (206), Expect(2) = 7e-20
Identities = 37/69 (53%), Positives = 49/69 (70%), Gaps = 3/69 (4%)
Frame = -3
Query: 546 GGG---VPIPAAGGRKWCVPKADASNQALQANINYVCSQNVDCKPIQPGGTCFAPNDVRA 376
GGG +P P+ G KWCV ++ A+N LQ +IN+VC Q VDCKPIQ GG+CF P+ +R
Sbjct: 350 GGGRPALPAPSTAGGKWCVARSGATNTQLQDSINWVCGQGVDCKPIQAGGSCFNPSSLRT 409
Query: 375 LATYAMNAY 349
A++ MNAY
Sbjct: 410 HASFVMNAY 418
Score = 34.7 bits (78), Expect(2) = 7e-20
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 344 QANGRHDYNCDFSHTAVITSTNPSHGNCR 258
Q++GR D C+FS T +I NPS+G C+
Sbjct: 420 QSHGRTDGACNFSGTGMIVGNNPSNGACK 448
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,654,409
Number of Sequences: 1393205
Number of extensions: 10218300
Number of successful extensions: 25165
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 24252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25112
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
