Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004005A_C01 KMC004005A_c01
(594 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK63247.1|AF367433_1 phosphatidylinositol transfer-like prot... 158 4e-38
ref|NP_568054.1| SEC14 - like protein; protein id: At4g39170.1, ... 125 3e-28
pir||T08565 hypothetical protein T22F8.70 - Arabidopsis thaliana... 125 3e-28
ref|NP_179747.1| putative phosphatidylinositol/phosphatidylcholi... 124 1e-27
gb|AAL07100.1| putative sec14 cytosolic factor [Arabidopsis thal... 122 4e-27
>gb|AAK63247.1|AF367433_1 phosphatidylinositol transfer-like protein III [Lotus japonicus]
Length = 625
Score = 158 bits (400), Expect = 4e-38
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = -1
Query: 594 MLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 415
MLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE
Sbjct: 546 MLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 605
Query: 414 LLAYIDRQAEAKLRKKRFCW 355
LLAYIDRQAEAKLRKKRFCW
Sbjct: 606 LLAYIDRQAEAKLRKKRFCW 625
>ref|NP_568054.1| SEC14 - like protein; protein id: At4g39170.1, supported by cDNA:
gi_14335005 [Arabidopsis thaliana]
Length = 614
Score = 125 bits (315), Expect = 3e-28
Identities = 65/76 (85%), Positives = 70/76 (91%)
Frame = -1
Query: 594 MLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 415
+LK+L ELEEK+ LQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE
Sbjct: 530 VLKKLTELEEKIGALQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 589
Query: 414 LLAYIDRQAEAKLRKK 367
LLAYIDRQ A+ +KK
Sbjct: 590 LLAYIDRQEAAQHQKK 605
>pir||T08565 hypothetical protein T22F8.70 - Arabidopsis thaliana
gi|4914429|emb|CAB43632.1| SEC14-like protein
[Arabidopsis thaliana] gi|7270900|emb|CAB80580.1|
SEC14-like protein [Arabidopsis thaliana]
Length = 617
Score = 125 bits (315), Expect = 3e-28
Identities = 65/76 (85%), Positives = 70/76 (91%)
Frame = -1
Query: 594 MLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 415
+LK+L ELEEK+ LQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE
Sbjct: 533 VLKKLTELEEKIGALQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 592
Query: 414 LLAYIDRQAEAKLRKK 367
LLAYIDRQ A+ +KK
Sbjct: 593 LLAYIDRQEAAQHQKK 608
>ref|NP_179747.1| putative phosphatidylinositol/phosphatidylcholine transfer protein;
protein id: At2g21520.1 [Arabidopsis thaliana]
gi|25412046|pir||C84602 hypothetical protein At2g21520
[imported] - Arabidopsis thaliana
gi|4567283|gb|AAD23696.1| putative
phosphatidylinositol/phosphatidylcholine transfer
protein [Arabidopsis thaliana]
Length = 531
Score = 124 bits (310), Expect = 1e-27
Identities = 63/75 (84%), Positives = 69/75 (92%)
Frame = -1
Query: 588 KRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEELL 409
K+L ELE K+ TLQSKP+EMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEELL
Sbjct: 447 KKLTELEGKIGTLQSKPNEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEELL 506
Query: 408 AYIDRQAEAKLRKKR 364
AYIDRQ EA+ +K +
Sbjct: 507 AYIDRQEEAQFQKMK 521
>gb|AAL07100.1| putative sec14 cytosolic factor [Arabidopsis thaliana]
Length = 608
Score = 122 bits (305), Expect = 4e-27
Identities = 59/80 (73%), Positives = 71/80 (88%)
Frame = -1
Query: 594 MLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEE 415
+L RLG+LE++++ L S+ SEMP+EKEELLNAAV RVDALEAELI TKKAL+EAL+RQEE
Sbjct: 529 VLSRLGDLEKQIENLHSRKSEMPHEKEELLNAAVYRVDALEAELITTKKALHEALIRQEE 588
Query: 414 LLAYIDRQAEAKLRKKRFCW 355
LL YIDRQ EAK R+K+FCW
Sbjct: 589 LLGYIDRQKEAKCRRKKFCW 608
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 460,324,109
Number of Sequences: 1393205
Number of extensions: 9554597
Number of successful extensions: 28252
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 27193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28235
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
