Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003996A_C01 KMC003996A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P93329|NO20_MEDTR EARLY NODULIN 20 PRECURSOR (N-20) gi|177135... 41 0.011
dbj|BAC15819.1| contains ESTs AU077703(E50915),AU077704(E50915)~... 41 0.011
gb|AAA18800.1| membrane protein 41 0.011
sp|P23093|CSP_PLABA Circumsporozoite protein precursor (CS) gi|9... 40 0.018
dbj|BAC15815.1| contains ESTs AU077704(E50915),AU077703(E50915)~... 40 0.018
>sp|P93329|NO20_MEDTR EARLY NODULIN 20 PRECURSOR (N-20) gi|1771351|emb|CAA67830.1| ENOD20
[Medicago truncatula]
Length = 268
Score = 40.8 bits (94), Expect = 0.011
Identities = 22/46 (47%), Positives = 23/46 (49%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
HP R P P SP SP PSP PSP P+S H R S SP
Sbjct: 153 HPPRRSLPSP-PSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSP 197
>dbj|BAC15819.1| contains ESTs AU077703(E50915),AU077704(E50915)~proline-rich
protein,cell wall-protein like [Oryza sativa (japonica
cultivar-group)]
Length = 247
Score = 40.8 bits (94), Expect = 0.011
Identities = 18/48 (37%), Positives = 27/48 (55%), Gaps = 1/48 (2%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP-PD 396
P +P+P PK SP+P P+P+P+P+ + D N + SP PD
Sbjct: 60 PQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPQPNPQPDPKQSPQPD 107
Score = 38.5 bits (88), Expect = 0.053
Identities = 13/28 (46%), Positives = 21/28 (74%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQ 453
P + +P+P SPK+ PKP+P+P P+P+
Sbjct: 156 PKQDPQPNPQPSPKADPKPNPKPKPQPE 183
Score = 38.5 bits (88), Expect = 0.053
Identities = 14/36 (38%), Positives = 22/36 (60%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRN 429
P + +P+P PK SP+P P+P+P+P + D N
Sbjct: 88 PKQDPQPNPQPDPKQSPQPDPKPTPQPNPKQDPQPN 123
Score = 36.6 bits (83), Expect = 0.20
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
PN P P P+ SP P P P+P+P+ Q D
Sbjct: 186 PNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPD 217
Score = 34.7 bits (78), Expect = 0.76
Identities = 14/47 (29%), Positives = 27/47 (56%)
Frame = -3
Query: 521 RPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGK 381
+P+P + P+ +P+P+P+P+P+ + D N + S P + K K
Sbjct: 133 QPNPKQDPQPNPQPNPKPTPQLDPKQDPQPNPQPSPKADPKPNPKPK 179
Score = 34.7 bits (78), Expect = 0.76
Identities = 12/45 (26%), Positives = 24/45 (52%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
P +P+P P+ P P+P+P P+P+ + + N + + + P
Sbjct: 168 PKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPKP 212
Score = 34.3 bits (77), Expect = 0.99
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
+P +P +PK P+P+P+P+P+P Q D ++ + + SP
Sbjct: 123 NPQPDPKPTLQPNPKQDPQPNPQPNPKPTPQLDPKQDPQPNPQPSP 168
Score = 34.3 bits (77), Expect = 0.99
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQ 447
P P P +PK P+P P+P P+PQ +
Sbjct: 198 PEPSPNPKPNPNPKPEPQPDPKPEPKPQPE 227
Score = 34.3 bits (77), Expect = 0.99
Identities = 14/51 (27%), Positives = 25/51 (48%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
+P +P P PK +P+P P+ P+P Q D ++ + +P + K
Sbjct: 67 NPQPDPKPSPQPDPKPTPQPEPKQDPQPNPQPDPKQSPQPDPKPTPQPNPK 117
Score = 33.9 bits (76), Expect = 1.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
P +P+P +P+ PK P+P+P+P + D N + P + K
Sbjct: 140 PQPNPQPNPKPTPQLDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPK 189
Score = 33.9 bits (76), Expect = 1.3
Identities = 13/45 (28%), Positives = 25/45 (54%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
P +P P +PK P+P+P+P P+P Q + ++ + + +P
Sbjct: 104 PQPDPKPTPQPNPKQDPQPNPQPDPKPTLQPNPKQDPQPNPQPNP 148
Score = 33.9 bits (76), Expect = 1.3
Identities = 11/30 (36%), Positives = 18/30 (59%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQ 447
P+ +P P PK P P+P+P+P P+ +
Sbjct: 184 PSPNPKPEPKPEPKPEPSPNPKPNPNPKPE 213
Score = 33.9 bits (76), Expect = 1.3
Identities = 15/52 (28%), Positives = 23/52 (43%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGK 381
P +P P PK +PKP P+P P P + + + S +P + K
Sbjct: 160 PQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPK 211
Score = 33.5 bits (75), Expect = 1.7
Identities = 14/46 (30%), Positives = 23/46 (49%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
+P +P P SP+ PKP+P+P P+ Q + + + S P
Sbjct: 63 NPQPNPQPDPKPSPQPDPKPTPQPEPKQDPQPNPQPDPKQSPQPDP 108
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 521 RPHPLKSPKSSPKPSPRPSPRPQSQTD 441
+P P P+ KPSP+P+P+P Q D
Sbjct: 45 KPDPTPKPQPETKPSPQPNPQPNPQPD 71
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (54%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQ 453
+P +P P P +PKP+P P P PQ
Sbjct: 187 NPKPEPKPEPKPEPSPNPKPNPNPKPEPQ 215
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRP 456
PN P+P P+ PKP P+P P P
Sbjct: 202 PNPKPNPNPKPEPQPDPKPEPKPQPEP 228
Score = 33.5 bits (75), Expect = 1.7
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
PN +P P SP P+P P P P P + N + P K
Sbjct: 174 PNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPDPKPEPK 223
Score = 33.1 bits (74), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (56%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRP 456
+P +P P +PK PKP P+P P P
Sbjct: 175 NPKPKPQPEPSPNPKPEPKPEPKPEPSP 202
Score = 32.7 bits (73), Expect = 2.9
Identities = 12/32 (37%), Positives = 19/32 (58%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
P +P SP+ +P+P+P+P P+P Q D
Sbjct: 48 PTPKPQPETKPSPQPNPQPNPQPDPKPSPQPD 79
Score = 32.7 bits (73), Expect = 2.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
P + +P P +P+ +PK P+P+P+P + N + +P + K
Sbjct: 100 PKQSPQPDPKPTPQPNPKQDPQPNPQPDPKPTLQPNPKQDPQPNPQPNPK 149
Score = 32.0 bits (71), Expect = 4.9
Identities = 14/46 (30%), Positives = 19/46 (40%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPP 399
P P P SP P P+P+P P+P + + S PP
Sbjct: 190 PEPKPEPKPEPSPNPKPNPNPKPEPQPDPKPEPKPQPEPSQPKLPP 235
Score = 32.0 bits (71), Expect = 4.9
Identities = 14/51 (27%), Positives = 24/51 (46%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
+P +P P PK P+P+P+PSP+ + + + S +P K
Sbjct: 143 NPQPNPKPTPQLDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEPK 193
Score = 31.6 bits (70), Expect = 6.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
P + P +P+ SPK P+P+P+P+ Q + N + P
Sbjct: 152 PQLDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEPKPEP 196
Score = 31.6 bits (70), Expect = 6.4
Identities = 12/45 (26%), Positives = 25/45 (54%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
P +P+P + P+ +P+P P+P+ +P + D N + + +P
Sbjct: 108 PKPTPQPNPKQDPQPNPQPDPKPTLQPNPKQDPQPNPQPNPKPTP 152
>gb|AAA18800.1| membrane protein
Length = 480
Score = 40.8 bits (94), Expect = 0.011
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGKE 378
P++ H+P P P++ P+P P+P P+P+ Q + P+H K+
Sbjct: 232 PDQHHQPTPAAQPQTQPQPEPQPEPQPEPQPEPQPEPVQEPPEQTPEHTPSKD 284
Score = 32.7 bits (73), Expect = 2.9
Identities = 13/40 (32%), Positives = 16/40 (39%)
Frame = -3
Query: 518 PHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPP 399
P P P+ P+P P P P QT H + S P
Sbjct: 252 PQPEPQPEPQPEPQPEPVQEPPEQTPEHTPSKDDASGEVP 291
>sp|P23093|CSP_PLABA Circumsporozoite protein precursor (CS) gi|9785|emb|CAA35608.1|
precursor protein (AA -20 to 327) [Plasmodium berghei]
Length = 347
Score = 40.0 bits (92), Expect = 0.018
Identities = 17/55 (30%), Positives = 25/55 (44%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGKER 375
+P RP P P+ P+P P+P PRPQ Q N +N+ + E+
Sbjct: 213 NPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPGGNNNNKNNNNDDSYIPSAEK 267
Score = 35.8 bits (81), Expect = 0.34
Identities = 14/44 (31%), Positives = 22/44 (49%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNS 405
P + P P P+ P+P P+P P+PQ Q + G+N+
Sbjct: 208 PQGNNNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPGGNNN 251
Score = 34.7 bits (78), Expect = 0.76
Identities = 13/42 (30%), Positives = 21/42 (49%)
Frame = -3
Query: 533 NRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSN 408
N +P P P+ P+P P+P P+PQ + G+ +N
Sbjct: 211 NNNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPGGNNNN 252
Score = 33.5 bits (75), Expect = 1.7
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGKER*N 369
+PN P +P+ P+P P+P P+PQ Q R P + K N
Sbjct: 201 NPNDPAPPQGNNNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPGGNNNNKNNNN 257
>dbj|BAC15815.1| contains ESTs AU077704(E50915),AU077703(E50915)~proline-rich
protein,cell wall-protein like [Oryza sativa (japonica
cultivar-group)]
Length = 247
Score = 40.0 bits (92), Expect = 0.018
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
P + +P+P PK SP+P P+P+P+P + D N + +P + K
Sbjct: 88 PKQDPKPNPQPDPKPSPQPDPKPTPQPDPKQDPQPNPQPDPKPTPQPNPK 137
Score = 39.7 bits (91), Expect = 0.024
Identities = 18/48 (37%), Positives = 27/48 (55%), Gaps = 1/48 (2%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP-PD 396
P +P+P PK SP+P P+P+P+P+ + D N + SP PD
Sbjct: 60 PQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPKPNPQPDPKPSPQPD 107
Score = 38.5 bits (88), Expect = 0.053
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGK 381
P +P+P + P+ +P+P P+P+P+P + D N + S P + K K
Sbjct: 128 PKPTPQPNPKQDPQPNPQPDPKPTPQPDPKQDPQPNPQPSPKADPKPNPKPK 179
Score = 38.5 bits (88), Expect = 0.053
Identities = 13/28 (46%), Positives = 21/28 (74%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQ 453
P + +P+P SPK+ PKP+P+P P+P+
Sbjct: 156 PKQDPQPNPQPSPKADPKPNPKPKPQPE 183
Score = 37.7 bits (86), Expect = 0.090
Identities = 15/46 (32%), Positives = 26/46 (55%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
+P +P P +PK P+P+P+P P+P Q D ++ + + SP
Sbjct: 123 NPQPDPKPTPQPNPKQDPQPNPQPDPKPTPQPDPKQDPQPNPQPSP 168
Score = 36.6 bits (83), Expect = 0.20
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
PN P P P+ SP P P P+P+P+ Q D
Sbjct: 186 PNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPD 217
Score = 34.7 bits (78), Expect = 0.76
Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 1/48 (2%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP-PD 396
P +P P + P+ +P+P P+P+P+P + D N + +P PD
Sbjct: 108 PKPTPQPDPKQDPQPNPQPDPKPTPQPNPKQDPQPNPQPDPKPTPQPD 155
Score = 34.7 bits (78), Expect = 0.76
Identities = 12/45 (26%), Positives = 24/45 (52%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
P +P+P P+ P P+P+P P+P+ + + N + + + P
Sbjct: 168 PKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPKP 212
Score = 34.3 bits (77), Expect = 0.99
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQ 447
P P P +PK P+P P+P P+PQ +
Sbjct: 198 PEPSPNPKPNPNPKPEPQPDPKPEPKPQPE 227
Score = 33.9 bits (76), Expect = 1.3
Identities = 11/30 (36%), Positives = 18/30 (59%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQ 447
P+ +P P PK P P+P+P+P P+ +
Sbjct: 184 PSPNPKPEPKPEPKPEPSPNPKPNPNPKPE 213
Score = 33.9 bits (76), Expect = 1.3
Identities = 15/52 (28%), Positives = 23/52 (43%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGK 381
P +P P PK +PKP P+P P P + + + S +P + K
Sbjct: 160 PQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPK 211
Score = 33.5 bits (75), Expect = 1.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
P +P P +P+ PK P+P+P+P + D N + P + K
Sbjct: 140 PQPNPQPDPKPTPQPDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPK 189
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 521 RPHPLKSPKSSPKPSPRPSPRPQSQTD 441
+P P P+ KPSP+P+P+P Q D
Sbjct: 45 KPDPTPKPQPETKPSPQPNPQPNPQPD 71
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRP 456
PN P+P P+ PKP P+P P P
Sbjct: 202 PNPKPNPNPKPEPQPDPKPEPKPQPEP 228
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (54%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQ 453
+P +P P P +PKP+P P P PQ
Sbjct: 187 NPKPEPKPEPKPEPSPNPKPNPNPKPEPQ 215
Score = 33.5 bits (75), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
P + P +P+ PKPSP+P P+P Q D
Sbjct: 84 PQPEPKQDPKPNPQPDPKPSPQPDPKPTPQPD 115
Score = 33.5 bits (75), Expect = 1.7
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
PN +P P SP P+P P P P P + N + P K
Sbjct: 174 PNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPDPKPEPK 223
Score = 33.5 bits (75), Expect = 1.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
+P +P P PK +P+P P+ P+P Q D
Sbjct: 67 NPQPDPKPSPQPDPKPTPQPEPKQDPKPNPQPD 99
Score = 33.1 bits (74), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (56%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRP 456
+P +P P +PK PKP P+P P P
Sbjct: 175 NPKPKPQPEPSPNPKPEPKPEPKPEPSP 202
Score = 33.1 bits (74), Expect = 2.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
+P +P P PK +P+P P+ P+P Q D
Sbjct: 95 NPQPDPKPSPQPDPKPTPQPDPKQDPQPNPQPD 127
Score = 32.7 bits (73), Expect = 2.9
Identities = 12/32 (37%), Positives = 19/32 (58%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTD 441
P +P SP+ +P+P+P+P P+P Q D
Sbjct: 48 PTPKPQPETKPSPQPNPQPNPQPDPKPSPQPD 79
Score = 32.0 bits (71), Expect = 4.9
Identities = 14/51 (27%), Positives = 24/51 (46%)
Frame = -3
Query: 539 HPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQK 387
+P +P P PK P+P+P+PSP+ + + + S +P K
Sbjct: 143 NPQPDPKPTPQPDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEPK 193
Score = 31.6 bits (70), Expect = 6.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSP 402
P + P +P+ SPK P+P+P+P+ Q + N + P
Sbjct: 152 PQPDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEPKPEP 196
Score = 31.6 bits (70), Expect = 6.4
Identities = 12/28 (42%), Positives = 14/28 (49%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQ 453
PN P P P++ P P P P P PQ
Sbjct: 42 PNPKPDPTPKPQPETKPSPQPNPQPNPQ 69
Score = 31.6 bits (70), Expect = 6.4
Identities = 14/46 (30%), Positives = 19/46 (40%)
Frame = -3
Query: 536 PNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPP 399
P P P SP P P+P+P P+P + + S PP
Sbjct: 190 PEPKPEPKPEPSPNPKPNPNPKPEPQPDPKPEPKPQPEPSLPKPPP 235
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,197,388
Number of Sequences: 1393205
Number of extensions: 10558826
Number of successful extensions: 98564
Number of sequences better than 10.0: 595
Number of HSP's better than 10.0 without gapping: 50177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83210
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
