Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003822A_C01 KMC003822A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA01818.1| agCP12236 [Anopheles gambiae str. PEST] 34 1.1
gb|EAA41102.1| GLP_306_19898_9507 [Giardia lamblia ATCC 50803] 33 1.9
>gb|EAA01818.1| agCP12236 [Anopheles gambiae str. PEST]
Length = 684
Score = 33.9 bits (76), Expect = 1.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -2
Query: 238 FTIEFFF*FTCFIYMELLCGS--------RAKAMSLMRATCANLDGELTDGLDCHVQNLG 83
FT F F+ + + L+ G+ R KA +++ C L G++T+GL C +L
Sbjct: 147 FTFRILFVFSVIVVILLISGTGYDLVLRRRYKAKMRIKSYCKELTGDMTNGLGCTTYDLT 206
Query: 82 GSKLHVLNKGDQNCTSV 32
+ KG NCT +
Sbjct: 207 HREPEENGKG--NCTVI 221
>gb|EAA41102.1| GLP_306_19898_9507 [Giardia lamblia ATCC 50803]
Length = 3463
Score = 33.1 bits (74), Expect = 1.9
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 384 SMVGVHSPPSMVLALKEALLTYLCFNRSIDY*GLELGKFGRTNIWVMFFLPLNFFFNSPV 205
S+ VH+ P + L+L +L Y C+N I L +GK R + +M LP++ + V
Sbjct: 265 SLSHVHNGPWITLSLSTFILFYSCYNILITIFPLIVGKVSRYSTLLMICLPISLAVSVGV 324
Query: 204 LFT 196
T
Sbjct: 325 TVT 327
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,852,997
Number of Sequences: 1393205
Number of extensions: 8814337
Number of successful extensions: 21323
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21314
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
