Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003745A_C01 KMC003745A_c01
(457 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG34813.1|AF243378_1 glutathione S-transferase GST 23 [Glyci... 121 3e-27
gb|AAF64449.1|AF239927_1 glutathione S-transferase [Euphorbia es... 71 6e-12
gb|AAM98138.1| glutathione transferase [Arabidopsis thaliana] 69 3e-11
pir||T52580 glutathione transferase (EC 2.5.1.18) GST 10b [impor... 69 3e-11
dbj|BAB11100.1| glutathione transferase [Arabidopsis thaliana] 69 3e-11
>gb|AAG34813.1|AF243378_1 glutathione S-transferase GST 23 [Glycine max]
Length = 250
Score = 121 bits (304), Expect = 3e-27
Identities = 58/73 (79%), Positives = 64/73 (87%)
Frame = -2
Query: 456 QLELLDEKDRDRILGPPKKVQQWIESTKNATRPHFDEVHNVLYKLKTKLSVPPSKQADSV 277
QLELLDEKDRDRILGP KKVQQWIEST+NATRPHFDEVH +LYKLKT+LS S QAD V
Sbjct: 178 QLELLDEKDRDRILGPHKKVQQWIESTRNATRPHFDEVHTILYKLKTRLSEQQSNQADGV 237
Query: 276 MEPRIKTPLTSKL 238
M+ RI+TPL SK+
Sbjct: 238 MQSRIRTPLNSKM 250
>gb|AAF64449.1|AF239927_1 glutathione S-transferase [Euphorbia esula]
Length = 238
Score = 70.9 bits (172), Expect = 6e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = -2
Query: 456 QLELLDEKDRDRILGPPKKVQQWIESTKNATRPHFDEVHNVLYKLKTKL--SVPPSKQAD 283
QLE L+E DR RILGP KKVQQWIE TK AT PHFDEVH L++ + + +P ++++
Sbjct: 178 QLEFLEEDDRKRILGPFKKVQQWIEDTKIATNPHFDEVHETLFQARAMILKQIPTGEKSE 237
Query: 282 S 280
+
Sbjct: 238 A 238
>gb|AAM98138.1| glutathione transferase [Arabidopsis thaliana]
Length = 591
Score = 68.6 bits (166), Expect = 3e-11
Identities = 30/48 (62%), Positives = 39/48 (80%)
Frame = -2
Query: 456 QLELLDEKDRDRILGPPKKVQQWIESTKNATRPHFDEVHNVLYKLKTK 313
QL++LD+KDR R+L P KKV+QWIEST+ AT PH DEVH VL++ K +
Sbjct: 178 QLQVLDDKDRLRLLSPHKKVEQWIESTRKATMPHSDEVHEVLFRAKDR 225
>pir||T52580 glutathione transferase (EC 2.5.1.18) GST 10b [imported] -
Arabidopsis thaliana gi|4218144|emb|CAA10662.1|
glutathione transferase, GST 10b [Arabidopsis thaliana]
Length = 245
Score = 68.6 bits (166), Expect = 3e-11
Identities = 30/48 (62%), Positives = 39/48 (80%)
Frame = -2
Query: 456 QLELLDEKDRDRILGPPKKVQQWIESTKNATRPHFDEVHNVLYKLKTK 313
QL++LD+KDR R+L P KKV+QWIEST+ AT PH DEVH VL++ K +
Sbjct: 179 QLQVLDDKDRLRLLSPHKKVEQWIESTRKATMPHSDEVHEVLFRAKDR 226
>dbj|BAB11100.1| glutathione transferase [Arabidopsis thaliana]
Length = 242
Score = 68.6 bits (166), Expect = 3e-11
Identities = 30/48 (62%), Positives = 39/48 (80%)
Frame = -2
Query: 456 QLELLDEKDRDRILGPPKKVQQWIESTKNATRPHFDEVHNVLYKLKTK 313
QL++LD+KDR R+L P KKV+QWIEST+ AT PH DEVH VL++ K +
Sbjct: 176 QLQVLDDKDRLRLLSPHKKVEQWIESTRKATMPHSDEVHEVLFRAKDR 223
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 350,756,108
Number of Sequences: 1393205
Number of extensions: 6563652
Number of successful extensions: 16730
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16724
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11413361193
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
