Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003740A_C01 KMC003740A_c01
(509 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N gi|7245407... 133 1e-30
emb|CAA67092.1| peroxidase [Arabidopsis thaliana] 133 1e-30
gb|AAM65571.1| peroxidase ATP N [Arabidopsis thaliana] 133 1e-30
ref|NP_568385.1| peroxidase, putative; protein id: At5g19890.1, ... 133 1e-30
sp|Q42517|PERN_ARMRU Peroxidase N precursor (Neutral peroxidase)... 130 9e-30
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N gi|7245407|pdb|1QGJ|B
Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 133 bits (334), Expect = 1e-30
Identities = 64/115 (55%), Positives = 84/115 (72%)
Frame = -1
Query: 509 PDDTIETDTLTELQNLCPESGDGNITSVLDQDSADQFDNHYFKNLLHGKGLLGSDQILFS 330
PD T+ET L+ LQ +CP G+ NIT+ LD+ + D FDN+YFKNLL GKGLL SDQILFS
Sbjct: 188 PDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFS 247
Query: 329 SEDATATTKPLVQFYSENERFFLMEFAYAMVKMGNINPLTGSEGEIRKNCRVVNS 165
S+ A TTK LV+ YS ++ F +F AM++MGNI+ G+ GE+R NCRV+N+
Sbjct: 248 SDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVINN 300
>emb|CAA67092.1| peroxidase [Arabidopsis thaliana]
Length = 328
Score = 133 bits (334), Expect = 1e-30
Identities = 64/115 (55%), Positives = 84/115 (72%)
Frame = -1
Query: 509 PDDTIETDTLTELQNLCPESGDGNITSVLDQDSADQFDNHYFKNLLHGKGLLGSDQILFS 330
PD T+ET L+ LQ +CP G+ NIT+ LD+ + D FDN+YFKNLL GKGLL SDQILFS
Sbjct: 216 PDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFS 275
Query: 329 SEDATATTKPLVQFYSENERFFLMEFAYAMVKMGNINPLTGSEGEIRKNCRVVNS 165
S+ A TTK LV+ YS ++ F +F AM++MGNI+ G+ GE+R NCRV+N+
Sbjct: 276 SDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVINN 328
>gb|AAM65571.1| peroxidase ATP N [Arabidopsis thaliana]
Length = 328
Score = 133 bits (334), Expect = 1e-30
Identities = 64/115 (55%), Positives = 84/115 (72%)
Frame = -1
Query: 509 PDDTIETDTLTELQNLCPESGDGNITSVLDQDSADQFDNHYFKNLLHGKGLLGSDQILFS 330
PD T+ET L+ LQ +CP G+ NIT+ LD+ + D FDN+YFKNLL GKGLL SDQILFS
Sbjct: 216 PDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFS 275
Query: 329 SEDATATTKPLVQFYSENERFFLMEFAYAMVKMGNINPLTGSEGEIRKNCRVVNS 165
S+ A TTK LV+ YS ++ F +F AM++MGNI+ G+ GE+R NCRV+N+
Sbjct: 276 SDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVINN 328
>ref|NP_568385.1| peroxidase, putative; protein id: At5g19890.1, supported by cDNA:
40493. [Arabidopsis thaliana]
gi|26397630|sp|Q39034|PE59_ARATH Peroxidase 59 precursor
(Atperox P59) (Peroxidase N) (ATPN)
gi|21703112|gb|AAM74498.1| AT5g19890/F28I16_40
[Arabidopsis thaliana] gi|23308363|gb|AAN18151.1|
At5g19890/F28I16_40 [Arabidopsis thaliana]
Length = 328
Score = 133 bits (334), Expect = 1e-30
Identities = 64/115 (55%), Positives = 84/115 (72%)
Frame = -1
Query: 509 PDDTIETDTLTELQNLCPESGDGNITSVLDQDSADQFDNHYFKNLLHGKGLLGSDQILFS 330
PD T+ET L+ LQ +CP G+ NIT+ LD+ + D FDN+YFKNLL GKGLL SDQILFS
Sbjct: 216 PDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFS 275
Query: 329 SEDATATTKPLVQFYSENERFFLMEFAYAMVKMGNINPLTGSEGEIRKNCRVVNS 165
S+ A TTK LV+ YS ++ F +F AM++MGNI+ G+ GE+R NCRV+N+
Sbjct: 276 SDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVINN 328
>sp|Q42517|PERN_ARMRU Peroxidase N precursor (Neutral peroxidase) gi|99773|pir||S14268
peroxidase (EC 1.11.1.7), neutral - horseradish
gi|16096|emb|CAA40796.1| peroxidase [Armoracia
rusticana]
Length = 327
Score = 130 bits (327), Expect = 9e-30
Identities = 62/114 (54%), Positives = 85/114 (74%)
Frame = -1
Query: 509 PDDTIETDTLTELQNLCPESGDGNITSVLDQDSADQFDNHYFKNLLHGKGLLGSDQILFS 330
PD T+ET L++LQ +CP G+GN T+ LD++S D FDN+YFKNLL GKGLL SDQILFS
Sbjct: 216 PDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFS 275
Query: 329 SEDATATTKPLVQFYSENERFFLMEFAYAMVKMGNINPLTGSEGEIRKNCRVVN 168
S+ A TTK LV+ YS ++ F +F +M++MG++ + G+ GE+R NCRV+N
Sbjct: 276 SDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTNCRVIN 327
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,415,492
Number of Sequences: 1393205
Number of extensions: 8404244
Number of successful extensions: 18803
Number of sequences better than 10.0: 460
Number of HSP's better than 10.0 without gapping: 18031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18397
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
