Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003729A_C01 KMC003729A_c01
(753 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK12936.1|AF323104_1 phosphatase-like protein Psc923 [Pisum ... 149 2e-48
gb|AAK12935.1|AF323103_1 phosphatase-like protein Mtc923 [Medica... 150 2e-48
gb|AAK92701.1| putative phosphatase [Arabidopsis thaliana] 119 5e-37
ref|NP_567463.1| phosphatase like protein; protein id: At4g15410... 119 5e-37
pir||F71418 hypothetical protein - Arabidopsis thaliana gi|22448... 119 5e-34
>gb|AAK12936.1|AF323104_1 phosphatase-like protein Psc923 [Pisum sativum]
Length = 400
Score = 149 bits (376), Expect(2) = 2e-48
Identities = 77/98 (78%), Positives = 84/98 (85%)
Frame = -1
Query: 753 EENYPEPAKPRHLPFRGVGRTLGSSSSGSEAAGEPIQATAAAASSRSTAPTPEIGLVVDD 574
+ENYPEP KPR+ PFRGVGRTLG SSS EAA EP Q TAA+ASS T P P +GLVVD+
Sbjct: 265 DENYPEPVKPRNTPFRGVGRTLGDSSSSGEAASEPTQ-TAASASS-FTVPVPTMGLVVDE 322
Query: 573 SKPVTSIQLRLADGTRMVSRFNHHHTIRDIRAFIDASR 460
S+PVTSIQLRLADGTRMVSRFNH HTIRD+RAFIDASR
Sbjct: 323 SQPVTSIQLRLADGTRMVSRFNHRHTIRDVRAFIDASR 360
Score = 66.2 bits (160), Expect(2) = 2e-48
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -3
Query: 448 ARSYHMQTMGFPPKQLTDLEQTIEQAGIANSVIIPKL 338
ARSY +QTMGFPPKQLTDL+QTIE AGIANSV+I KL
Sbjct: 364 ARSYQLQTMGFPPKQLTDLDQTIEHAGIANSVVIQKL 400
>gb|AAK12935.1|AF323103_1 phosphatase-like protein Mtc923 [Medicago truncatula]
Length = 405
Score = 150 bits (378), Expect(2) = 2e-48
Identities = 77/99 (77%), Positives = 81/99 (81%)
Frame = -1
Query: 753 EENYPEPAKPRHLPFRGVGRTLGSSSSGSEAAGEPIQATAAAASSRSTAPTPEIGLVVDD 574
+ENYPEP KPR+ FRGVGRTLG SSS EAA P Q TA A S TAP P +GLVVDD
Sbjct: 270 DENYPEPVKPRNTAFRGVGRTLGDSSSNGEAASGPSQTTADA--SPLTAPAPAMGLVVDD 327
Query: 573 SKPVTSIQLRLADGTRMVSRFNHHHTIRDIRAFIDASRP 457
SKPVTSIQLRL+DGTRMVSRFNHHH IRDIRAFIDASRP
Sbjct: 328 SKPVTSIQLRLSDGTRMVSRFNHHHAIRDIRAFIDASRP 366
Score = 65.1 bits (157), Expect(2) = 2e-48
Identities = 30/35 (85%), Positives = 33/35 (93%)
Frame = -3
Query: 445 RSYHMQTMGFPPKQLTDLEQTIEQAGIANSVIIPK 341
RSY +QTMGFPPKQLTDL+QTIEQAGIANSV+I K
Sbjct: 370 RSYQLQTMGFPPKQLTDLDQTIEQAGIANSVVIQK 404
>gb|AAK92701.1| putative phosphatase [Arabidopsis thaliana]
Length = 421
Score = 119 bits (299), Expect(2) = 5e-37
Identities = 60/98 (61%), Positives = 76/98 (77%)
Frame = -1
Query: 750 ENYPEPAKPRHLPFRGVGRTLGSSSSGSEAAGEPIQATAAAASSRSTAPTPEIGLVVDDS 571
EN+ EP KP++ PF+GVGRTLG+S SGS +A + A+++ + AP P GLVVD +
Sbjct: 292 ENFTEPPKPKN-PFQGVGRTLGASGSGSSSAPQ------ASSAPMNVAPAPSRGLVVDPA 344
Query: 570 KPVTSIQLRLADGTRMVSRFNHHHTIRDIRAFIDASRP 457
P TSIQLRLADGTR+VSRFN+HHT+RD+R FIDASRP
Sbjct: 345 APTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRP 382
Score = 57.4 bits (137), Expect(2) = 5e-37
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = -3
Query: 448 ARSYHMQTMGFPPKQLTDLEQTIEQAGIANSVIIPK 341
++ Y + TMGFPPKQLT+L+QTIEQAGIAN+V+I K
Sbjct: 385 SKEYQLLTMGFPPKQLTELDQTIEQAGIANAVVIQK 420
>ref|NP_567463.1| phosphatase like protein; protein id: At4g15410.1, supported by
cDNA: gi_15292664 [Arabidopsis thaliana]
Length = 421
Score = 119 bits (299), Expect(2) = 5e-37
Identities = 60/98 (61%), Positives = 76/98 (77%)
Frame = -1
Query: 750 ENYPEPAKPRHLPFRGVGRTLGSSSSGSEAAGEPIQATAAAASSRSTAPTPEIGLVVDDS 571
EN+ EP KP++ PF+GVGRTLG+S SGS +A + A+++ + AP P GLVVD +
Sbjct: 292 ENFTEPPKPKN-PFQGVGRTLGASGSGSSSAPQ------ASSAPMNVAPAPSRGLVVDPA 344
Query: 570 KPVTSIQLRLADGTRMVSRFNHHHTIRDIRAFIDASRP 457
P TSIQLRLADGTR+VSRFN+HHT+RD+R FIDASRP
Sbjct: 345 APTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRP 382
Score = 57.4 bits (137), Expect(2) = 5e-37
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = -3
Query: 448 ARSYHMQTMGFPPKQLTDLEQTIEQAGIANSVIIPK 341
++ Y + TMGFPPKQLT+L+QTIEQAGIAN+V+I K
Sbjct: 385 SKEYQLLTMGFPPKQLTELDQTIEQAGIANAVVIQK 420
>pir||F71418 hypothetical protein - Arabidopsis thaliana
gi|2244898|emb|CAB10320.1| phosphatase like protein
[Arabidopsis thaliana] gi|7268288|emb|CAB78583.1|
phosphatase like protein [Arabidopsis thaliana]
Length = 969
Score = 119 bits (299), Expect(2) = 5e-34
Identities = 60/98 (61%), Positives = 76/98 (77%)
Frame = -1
Query: 750 ENYPEPAKPRHLPFRGVGRTLGSSSSGSEAAGEPIQATAAAASSRSTAPTPEIGLVVDDS 571
EN+ EP KP++ PF+GVGRTLG+S SGS +A + A+++ + AP P GLVVD +
Sbjct: 292 ENFTEPPKPKN-PFQGVGRTLGASGSGSSSAPQ------ASSAPMNVAPAPSRGLVVDPA 344
Query: 570 KPVTSIQLRLADGTRMVSRFNHHHTIRDIRAFIDASRP 457
P TSIQLRLADGTR+VSRFN+HHT+RD+R FIDASRP
Sbjct: 345 APTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRP 382
Score = 47.4 bits (111), Expect(2) = 5e-34
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = -3
Query: 448 ARSYHMQTMGFPPKQLTDLEQTIEQAGIANSVI 350
++ Y + TMGFPPKQLT+L+QTIEQAG ++
Sbjct: 385 SKEYQLLTMGFPPKQLTELDQTIEQAGFITKIL 417
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 666,557,264
Number of Sequences: 1393205
Number of extensions: 14820414
Number of successful extensions: 43742
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 40671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43591
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36595604110
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
