KMC003728A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC003728A_C01 KMC003728A_c01
aatgaaaatgaagtGCATAAAAAAGAGGTGTGTATATATCAGTGTGTATTATTGCATATA
TAAAGACAATATCCTCTTACATTAAATAAAAGCCACGACGCATTCATGGCATGCCCATGA
AACATAACAACTTAATTATAATTAAGTAGATCAAAGGGCCACCCACTCTAGCTCTTTTGC
TGCTGTCAAGCATGCATGTCATCCAACTCCTTGGCAAACACACTCATAATCTTAGCAGGC
AAGCAAACCAAAACCAAAATCCCTTCCTCTCCCTGCGCATTCTGACTCGGCACGGTGAAA
GTTCACCGCTGGAAAAGCCCCTGCCCCAGCCTGAGCAAGCCCACCATACACCGCCTTGCC
CCACCCAAAATCCAGCTCTCTAAACCCAGCATACGTCGTGTCCAACACCACACATGACCT
CACAACAGTAAACAAGGGCTTTCCCTCAGTCACCATCAGATCCGCCAGAGAGTGCATGTA
CTCCTCGCTCATCTCACCGCTCGCTTTCTTAATCAGCCTCACCGCATGCTCCAGCGGCTT
CTCACAAAGCTCCCCCGCCGTGGCAACCGCCGCAGGGAACGCGAAACAGTTACCGTAGTA
ACCGGTTGGGAAAGGAGGGTTGAACTTCCCACGCGCGTCGGTTATGCACATCATTCGAAC
CTCTTGGCTCGGGTCTAACTGTAAAGCTTTGGTGCGGCAACGCCAGATGTATGATGTGAG
GACCTCGTATGTGGTGGACTCAGTGTCAAGGTGGTGCGGGAGGTGGCGGCGAATGGCGGC
TATTTCGGCGGGTCCGAAGAAGAAGGATTGTTGCACGAAGTCTGTTCCGGTGAGGATGGG
GTCGGTGATTGTGTCGTCGGTTAGCTGTTCGTATTCACGGTGGTTGTGTGTGACGCGTGG
TGGGTCCCTCGCATGGAGGAGCTCCCTCTGCCAGACGGGGAGGATTGATGGTTCATTTGC
GCCTCGGGCTATTTCTACCACGGCGTACATGAAGTGAACTATGCCGgctccgtctgtcat
gacatggttaaagcggagagcaaagatgaaaccgccgcacttaagccgagtgacctaaga
ttcaaa


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003728A_C01 KMC003728A_c01
         (1086 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAN09798.1| benzoyl coenzyme A: benzyl alcohol benzoyl transf...   318  2e-91
pir||T03274 hsr201 protein, hypersensitivity-related - common to...   316  5e-91
gb|AAN09796.1| benzoyl coenzyme A: benzyl alcohol benzoyl transf...   315  7e-90
gb|AAG13627.1|AC078840_18 putative hypersensitivity-related (hsr...   272  1e-76
pir||T09666 probable anthranilate N-benzoyltransferase (EC 2.3.1...   257  3e-69

>gb|AAN09798.1| benzoyl coenzyme A: benzyl alcohol benzoyl transferase [Nicotiana
            tabacum]
          Length = 460

 Score =  318 bits (814), Expect(2) = 2e-91
 Identities = 152/257 (59%), Positives = 197/257 (76%)
 Frame = -1

Query: 1074 VTRLKCGGFIFALRFNHVMTDGAGIVHFMYAVVEIARGANEPSILPVWQRELLHARDPPR 895
            VTRL+CGGFIFALR NH M+D  G+V FM AV E+ARGA+ PSILPVW RELL+AR+PP+
Sbjct: 151  VTRLRCGGFIFALRLNHTMSDAPGLVQFMTAVGEMARGASAPSILPVWCRELLNARNPPQ 210

Query: 894  VTHNHREYEQLTDDTITDPILTGTDFVQQSFFFGPAEIAAIRRHLPHHLDTESTTYEVLT 715
            VT  H EY+++ D   T  I+   D V +SFFFGP+E++A+RR +PHHL  + +T+E+LT
Sbjct: 211  VTCTHHEYDEVRDTKGT--IIPLDDMVHKSFFFGPSEVSALRRFVPHHL-RKCSTFELLT 267

Query: 714  SYIWRCRTKALQLDPSQEVRMMCITDARGKFNPPFPTGYYGNCFAFPAAVATAGELCEKP 535
            + +WRCRT +L+ DP +EVR +CI +AR +FNPP PTGYYGN FAFP AV TA +L + P
Sbjct: 268  AVLWRCRTMSLKPDPEEEVRALCIVNARSRFNPPLPTGYYGNAFAFPVAVTTAAKLSKNP 327

Query: 534  LEHAVRLIKKASGEMSEEYMHSLADLMVTEGKPLFTVVRSCVVLDTTYAGFRELDFGWGK 355
            L +A+ L+KK   +++EEYM S+ADLMV +G+P FTVVR+ +V D T  GF E+DFGWGK
Sbjct: 328  LGYALELVKKTKSDVTEEYMKSVADLMVLKGRPHFTVVRTFLVSDVTRGGFGEVDFGWGK 387

Query: 354  AVYGGLAQAGAGAFPAV 304
            AVYGG A+ G GA P V
Sbjct: 388  AVYGGPAKGGVGAIPGV 404

 Score = 42.0 bits (97), Expect(2) = 2e-91
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -2

Query: 302 TFTVPSQNAQGEEGILVLVCLPAKIMSVFAKELDDM 195
           +F +P +N +GE GI+V +CLP   M  F KELD M
Sbjct: 406 SFYIPFKNKKGENGIVVPICLPGFAMETFVKELDGM 441

>pir||T03274 hsr201 protein, hypersensitivity-related - common tobacco
            gi|1171577|emb|CAA64636.1| hypersensitivity-related gene
            [Nicotiana tabacum]
          Length = 460

 Score =  316 bits (810), Expect(2) = 5e-91
 Identities = 151/257 (58%), Positives = 196/257 (75%)
 Frame = -1

Query: 1074 VTRLKCGGFIFALRFNHVMTDGAGIVHFMYAVVEIARGANEPSILPVWQRELLHARDPPR 895
            VTRL+CGGFIFALR NH M+D  G+V FM AV E+ARG + PSILPVW RELL+AR+PP+
Sbjct: 151  VTRLRCGGFIFALRLNHTMSDAPGLVQFMTAVGEMARGGSAPSILPVWCRELLNARNPPQ 210

Query: 894  VTHNHREYEQLTDDTITDPILTGTDFVQQSFFFGPAEIAAIRRHLPHHLDTESTTYEVLT 715
            VT  H EY+++ D   T  I+   D V +SFFFGP+E++A+RR +PHHL  + +T+E+LT
Sbjct: 211  VTCTHHEYDEVRDTKGT--IIPLDDMVHKSFFFGPSEVSALRRFVPHHL-RKCSTFELLT 267

Query: 714  SYIWRCRTKALQLDPSQEVRMMCITDARGKFNPPFPTGYYGNCFAFPAAVATAGELCEKP 535
            + +WRCRT +L+ DP +EVR +CI +AR +FNPP PTGYYGN FAFP AV TA +L + P
Sbjct: 268  AVLWRCRTMSLKPDPEEEVRALCIVNARSRFNPPLPTGYYGNAFAFPVAVTTAAKLSKNP 327

Query: 534  LEHAVRLIKKASGEMSEEYMHSLADLMVTEGKPLFTVVRSCVVLDTTYAGFRELDFGWGK 355
            L +A+ L+KK   +++EEYM S+ADLMV +G+P FTVVR+ +V D T  GF E+DFGWGK
Sbjct: 328  LGYALELVKKTKSDVTEEYMKSVADLMVLKGRPHFTVVRTFLVSDVTRGGFGEVDFGWGK 387

Query: 354  AVYGGLAQAGAGAFPAV 304
            AVYGG A+ G GA P V
Sbjct: 388  AVYGGPAKGGVGAIPGV 404

 Score = 42.0 bits (97), Expect(2) = 5e-91
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -2

Query: 302 TFTVPSQNAQGEEGILVLVCLPAKIMSVFAKELDDM 195
           +F +P +N +GE GI+V +CLP   M  F KELD M
Sbjct: 406 SFYIPFKNKKGENGIVVPICLPGFAMETFVKELDGM 441

>gb|AAN09796.1| benzoyl coenzyme A: benzyl alcohol benzoyl transferase [Clarkia
            breweri]
          Length = 456

 Score =  315 bits (806), Expect(2) = 7e-90
 Identities = 157/257 (61%), Positives = 189/257 (73%)
 Frame = -1

Query: 1074 VTRLKCGGFIFALRFNHVMTDGAGIVHFMYAVVEIARGANEPSILPVWQRELLHARDPPR 895
            VTRLKCG FIFALR NH M D AGIV FM AV E+ARGA  PS LPVW R +L+AR PP+
Sbjct: 150  VTRLKCGSFIFALRLNHTMADAAGIVLFMKAVGEMARGAATPSTLPVWDRHILNARVPPQ 209

Query: 894  VTHNHREYEQLTDDTITDPILTGTDFVQQSFFFGPAEIAAIRRHLPHHLDTESTTYEVLT 715
            VT NHREYE++   TI  P     D   +SFFFG  EI+A+R+ +P HL + STT EVLT
Sbjct: 210  VTFNHREYEEVKG-TIFTPF---DDLAHRSFFFGSTEISAMRKQIPPHLRSCSTTIEVLT 265

Query: 714  SYIWRCRTKALQLDPSQEVRMMCITDARGKFNPPFPTGYYGNCFAFPAAVATAGELCEKP 535
            + +WRCRT A++ +P +EVRM+CI +AR KFNPP P GYYGN FA PAAV TAG+LC  P
Sbjct: 266  ACLWRCRTLAIKPNPDEEVRMICIVNARSKFNPPLPDGYYGNAFAIPAAVTTAGKLCNNP 325

Query: 534  LEHAVRLIKKASGEMSEEYMHSLADLMVTEGKPLFTVVRSCVVLDTTYAGFRELDFGWGK 355
            L  A+ LI+KA  E++EEYMHS+ADLMV  G+P FTVV + +V D T AGF E+DFGWG+
Sbjct: 326  LGFALELIRKAKREVTEEYMHSVADLMVATGRPHFTVVNTYLVSDVTRAGFGEVDFGWGE 385

Query: 354  AVYGGLAQAGAGAFPAV 304
            AVYGG A+ G G  P V
Sbjct: 386  AVYGGPAKGGVGVIPGV 402

 Score = 39.7 bits (91), Expect(2) = 7e-90
 Identities = 15/35 (42%), Positives = 27/35 (76%)
 Frame = -2

Query: 302 TFTVPSQNAQGEEGILVLVCLPAKIMSVFAKELDD 198
           +F +P +N QGE+GI++ +CLP+  M +FA+ L++
Sbjct: 404 SFYIPLRNRQGEKGIVLPICLPSAAMEIFAEALNN 438

>gb|AAG13627.1|AC078840_18 putative hypersensitivity-related (hsr)protein [Oryza sativa
            (japonica cultivar-group)]
          Length = 553

 Score =  272 bits (696), Expect(2) = 1e-76
 Identities = 142/264 (53%), Positives = 175/264 (65%), Gaps = 7/264 (2%)
 Frame = -1

Query: 1074 VTRLKCGGFIFALRFNHVMTDGAGIVHFMYAVVEIARG--ANEPSILPVWQRELLHARDP 901
            VTRL CGGFI A+R +H M D  G+V F+ AV E+ARG  A  PS+ PVW RE+L AR P
Sbjct: 151  VTRLACGGFILAVRLHHTMADAQGLVQFLGAVAEMARGGAAAAPSVAPVWGREMLEARSP 210

Query: 900  PRVTHNHREYEQLTDDTITDPILTGTDFVQQSFFFGPAEIAAIRRHLPHHLDTESTTYEV 721
            PR    HREY+++ D   T  I+   D   +SFFFG  E+AA+R HL   +   +TT+EV
Sbjct: 211  PRPAFAHREYDEVPDTKGT--IIPLDDMAHRSFFFGAREVAAVRSHLAPGIRERATTFEV 268

Query: 720  LTSYIWRCRTKALQLDPSQEVRMMCITDARGKFNPP-----FPTGYYGNCFAFPAAVATA 556
            LT  +WRCRT AL  D  + +RM+CI +ARG           P GYYGN FAFP AVATA
Sbjct: 269  LTGCLWRCRTAALAPDDDEVMRMICIVNARGGGKSGGGAGMIPEGYYGNAFAFPVAVATA 328

Query: 555  GELCEKPLEHAVRLIKKASGEMSEEYMHSLADLMVTEGKPLFTVVRSCVVLDTTYAGFRE 376
            GEL  +PL +AV L++ A GE+S EYM S+ADLMV  G+P FTVVR+ +V D T AGF +
Sbjct: 329  GELRARPLGYAVELVRAAKGEVSVEYMRSVADLMVQRGRPHFTVVRAYLVSDVTKAGFGD 388

Query: 375  LDFGWGKAVYGGLAQAGAGAFPAV 304
            LDFGWGK  YGG A+ G GA P V
Sbjct: 389  LDFGWGKPAYGGPAKGGVGAIPGV 412

 Score = 38.1 bits (87), Expect(2) = 1e-76
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = -2

Query: 302 TFTVPSQNAQGEEGILVLVCLPAKIMSVFAKEL 204
           +F +P +NA+GE+GI+V +CLP   M  F +E+
Sbjct: 414 SFLIPFKNAKGEDGIVVPMCLPGPAMDKFVEEM 446

>pir||T09666 probable anthranilate N-benzoyltransferase (EC 2.3.1.144) - muskmelon
            (fragment) gi|1843440|emb|CAA94432.1| unknown [Cucumis
            melo]
          Length = 455

 Score =  257 bits (656), Expect(2) = 3e-69
 Identities = 130/251 (51%), Positives = 165/251 (64%)
 Frame = -1

Query: 1074 VTRLKCGGFIFALRFNHVMTDGAGIVHFMYAVVEIARGANEPSILPVWQRELLHARDPPR 895
            VTRLKCGGFIF L FNH M DG GIV FM A  EIARGA  PSILPVWQR LL ARDPPR
Sbjct: 145  VTRLKCGGFIFGLCFNHTMADGFGIVQFMKATAEIARGAFAPSILPVWQRALLTARDPPR 204

Query: 894  VTHNHREYEQLTDDTITDPILTGTDFVQQSFFFGPAEIAAIRRHLPHHLDTESTTYEVLT 715
            +T  H EY+Q+ D  +   ++     + Q FFF   +I+ +R+ LP HL  +  ++EVLT
Sbjct: 205  ITFRHYEYDQVVD--MKSGLIPVNSKIDQLFFFSQLQISTLRQTLPAHLH-DCPSFEVLT 261

Query: 714  SYIWRCRTKALQLDPSQEVRMMCITDARGKFNPPFPTGYYGNCFAFPAAVATAGELCEKP 535
            +Y+WR RT ALQ  P +EVR +C+ + R K +   P GYYGN    PA + TA +LC  P
Sbjct: 262  AYVWRLRTIALQFKPEEEVRFLCVMNLRSKID--IPLGYYGNAVVVPAVITTAAKLCGNP 319

Query: 534  LEHAVRLIKKASGEMSEEYMHSLADLMVTEGKPLFTVVRSCVVLDTTYAGFRELDFGWGK 355
            L +AV LI+KA  + + EY+ S  DLMV +G+P FTVV S ++ D T  G   +DFGWGK
Sbjct: 320  LGYAVDLIRKAKAKATMEYIKSTVDLMVIKGRPYFTVVGSFMMSDLTRIGVENVDFGWGK 379

Query: 354  AVYGGLAQAGA 322
            A++GG    GA
Sbjct: 380  AIFGGPTTTGA 390

 Score = 28.5 bits (62), Expect(2) = 3e-69
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 332 RLGQGLFQR*TFTVPSQNAQGEEGILVLVCLPAKIMSVF 216
           R+ +GL    +F VP  N  GE+G  + +CLP   M  F
Sbjct: 391 RITRGLV---SFCVPFMNRNGEKGTALSLCLPPPAMERF 426

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,070,275,646
Number of Sequences: 1393205
Number of extensions: 28881629
Number of successful extensions: 142831
Number of sequences better than 10.0: 867
Number of HSP's better than 10.0 without gapping: 93194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132021
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 65395842999
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPDL041e05_f BP054585 1 503
2 MR056c11_f BP080300 15 409
3 MFL010a10_f BP033725 21 574
4 MR022d07_f BP077673 36 417
5 GNf065f02 BP072205 37 461
6 SPDL009c09_f BP052523 56 505
7 SPD033h06_f BP046657 67 637
8 SPD043e01_f BP047428 240 446
9 MFB004h10_f BP034223 512 1093




Lotus japonicus
Kazusa DNA Research Institute