Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003724A_C01 KMC003724A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01859.1| protein arginine N-methyltransferase-like protei... 121 5e-27
ref|NP_060607.1| protein arginine N-methyltransferase 6; hypothe... 57 1e-07
sp|Q96LA8|ANM6_HUMAN Protein arginine N-methyltransferase 6 gi|1... 57 1e-07
ref|XP_227607.1| similar to Protein arginine N-methyltransferase... 56 2e-07
dbj|BAC28811.1| unnamed protein product [Mus musculus] 55 4e-07
>dbj|BAB01859.1| protein arginine N-methyltransferase-like protein [Arabidopsis
thaliana]
Length = 399
Score = 121 bits (303), Expect = 5e-27
Identities = 54/66 (81%), Positives = 63/66 (94%)
Frame = -3
Query: 504 STAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLTQSKENVRFMNIHLEYNSGGRAFV 325
ST+PE PPTHWQQT++YFYDPI++EQDQ+IEGSVTL+QSKEN RFMNIHLEY+S GR+FV
Sbjct: 334 STSPESPPTHWQQTIVYFYDPIDVEQDQVIEGSVTLSQSKENKRFMNIHLEYSSAGRSFV 393
Query: 324 KESVMR 307
KESVMR
Sbjct: 394 KESVMR 399
>ref|NP_060607.1| protein arginine N-methyltransferase 6; hypothetical protein
FLJ10559 [Homo sapiens] gi|7022668|dbj|BAA91681.1|
unnamed protein product [Homo sapiens]
gi|12803779|gb|AAH02729.1|AAH02729 hypothetical protein
FLJ10559 [Homo sapiens]
Length = 316
Score = 57.0 bits (136), Expect = 1e-07
Identities = 23/55 (41%), Positives = 36/55 (64%)
Frame = -3
Query: 504 STAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLTQSKENVRFMNIHLEYNSG 340
ST+P P THW+Q L+Y +P+++EQD + G +TL S++N R + + L Y G
Sbjct: 249 STSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVG 303
>sp|Q96LA8|ANM6_HUMAN Protein arginine N-methyltransferase 6 gi|15822652|gb|AAK85733.1|
arginine methyltransferase 6 [Homo sapiens]
Length = 375
Score = 57.0 bits (136), Expect = 1e-07
Identities = 23/55 (41%), Positives = 36/55 (64%)
Frame = -3
Query: 504 STAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLTQSKENVRFMNIHLEYNSG 340
ST+P P THW+Q L+Y +P+++EQD + G +TL S++N R + + L Y G
Sbjct: 308 STSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVG 362
>ref|XP_227607.1| similar to Protein arginine N-methyltransferase 6 [Rattus
norvegicus]
Length = 375
Score = 56.2 bits (134), Expect = 2e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -3
Query: 504 STAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLTQSKENVRFMNIHLEYNSG 340
ST+P P THW+Q L+Y +P+ +EQD I G +TL S++N R + + L Y G
Sbjct: 308 STSPFHPATHWKQALLYLNEPVPVEQDTDISGEITLLPSRDNPRRLRVLLRYKVG 362
>dbj|BAC28811.1| unnamed protein product [Mus musculus]
Length = 316
Score = 55.5 bits (132), Expect = 4e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -3
Query: 504 STAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLTQSKENVRFMNIHLEYNSG 340
ST+P P THW+Q L+Y +P+ +EQD I G +TL S +N R + I L Y G
Sbjct: 249 STSPFHPATHWKQALLYLNEPVPVEQDTDISGEITLLPSPDNPRRLRILLRYKVG 303
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 376,856,828
Number of Sequences: 1393205
Number of extensions: 7068955
Number of successful extensions: 14765
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 14413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14763
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
