Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003722A_C01 KMC003722A_c01
(619 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09261 JUN kinase-activation-domain-binding protein homolog... 244 8e-64
gb|AAG43411.1| JAB [Lycopersicon esculentum] 211 8e-54
pir||T02934 JUN-activation-domain-binding protein homolog - rice... 202 3e-51
gb|AAM65053.1| putative JUN kinase activator protein [Arabidopsi... 200 1e-50
ref|NP_173705.1| c-JUN coactivator protein AJH1; protein id: At1... 200 1e-50
>pir||T09261 JUN kinase-activation-domain-binding protein homolog - alfalfa
gi|3320379|gb|AAC26484.1| putative JUN kinase activation
domain binding protein [Medicago sativa]
Length = 357
Score = 244 bits (622), Expect = 8e-64
Identities = 124/128 (96%), Positives = 125/128 (96%)
Frame = -1
Query: 619 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF 440
ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF
Sbjct: 231 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF 290
Query: 439 GSLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSRTETTS 260
G L+APTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKS TE TS
Sbjct: 291 GPLVAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSHTE-TS 349
Query: 259 DPEPMIES 236
DPEPMIES
Sbjct: 350 DPEPMIES 357
>gb|AAG43411.1| JAB [Lycopersicon esculentum]
Length = 367
Score = 211 bits (536), Expect = 8e-54
Identities = 108/128 (84%), Positives = 116/128 (90%)
Frame = -1
Query: 619 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF 440
ITYFKSSLD HLLDLLWNKYWVNTLSSSPLL NGDYVAGQISDLAEK+EQAEN L+HSRF
Sbjct: 241 ITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLENGDYVAGQISDLAEKMEQAENHLSHSRF 300
Query: 439 GSLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSRTETTS 260
G L+A RKKEEES LAKITRDSAKITVEQVHGLMSQVIKDILFNSV ++ KS+TE S
Sbjct: 301 GHLVAAPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVCKSGKSQTE-PS 359
Query: 259 DPEPMIES 236
DPEPM+E+
Sbjct: 360 DPEPMVET 367
>pir||T02934 JUN-activation-domain-binding protein homolog - rice
gi|3420299|gb|AAC33765.1| jab1 protein [Oryza sativa
subsp. indica] gi|17025926|dbj|BAB72093.1|
JUN-activation-domain-binding protein homolog [Oryza
sativa] gi|24636586|dbj|BAC22747.1|
JUN-activation-domain-binding protein 1 [Oryza sativa
(japonica cultivar-group)]
Length = 360
Score = 202 bits (514), Expect = 3e-51
Identities = 101/130 (77%), Positives = 114/130 (87%), Gaps = 2/130 (1%)
Frame = -1
Query: 619 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF 440
ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGN DYVAGQI DLA+KLEQAE QLAHSR+
Sbjct: 231 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNRDYVAGQIFDLADKLEQAEGQLAHSRY 290
Query: 439 GSLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSRTET-- 266
G L+ +K++EESPLAK+TRDS+KIT EQVHGLMSQVIKDILFNSVH +NK+ T
Sbjct: 291 GMLMPSQRKKEQEESPLAKVTRDSSKITAEQVHGLMSQVIKDILFNSVHPSNKASTSAPD 350
Query: 265 TSDPEPMIES 236
+S PEPM+E+
Sbjct: 351 SSGPEPMVEA 360
>gb|AAM65053.1| putative JUN kinase activator protein [Arabidopsis thaliana]
Length = 357
Score = 200 bits (508), Expect = 1e-50
Identities = 107/130 (82%), Positives = 115/130 (88%), Gaps = 2/130 (1%)
Frame = -1
Query: 619 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF 440
ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QLA+SR+
Sbjct: 230 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRY 289
Query: 439 GSLIAPT--PRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSRTET 266
G IAP R+KE+E LAKITRDSAKITVEQVHGLMSQVIKDILFNS Q+ KS +
Sbjct: 290 GG-IAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKS-ADD 347
Query: 265 TSDPEPMIES 236
+SDPEPMI S
Sbjct: 348 SSDPEPMITS 357
>ref|NP_173705.1| c-JUN coactivator protein AJH1; protein id: At1g22920.1, supported
by cDNA: 36216., supported by cDNA: gi_2791884,
supported by cDNA: gi_3641313 [Arabidopsis thaliana]
gi|25349985|pir||C86363 Jun activation domain binding
protein homolog - Arabidopsis thaliana
gi|2462824|gb|AAB72159.1| similar to Jun activation
domain binding protein [Arabidopsis thaliana]
gi|2791885|gb|AAB96974.1| JAB1 [Arabidopsis thaliana]
gi|18056663|gb|AAL58105.1|AF395062_1 CSN complex subunit
5B [Arabidopsis thaliana]
Length = 357
Score = 200 bits (508), Expect = 1e-50
Identities = 107/130 (82%), Positives = 115/130 (88%), Gaps = 2/130 (1%)
Frame = -1
Query: 619 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRF 440
ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QLA+SR+
Sbjct: 230 ITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRY 289
Query: 439 GSLIAPT--PRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSRTET 266
G IAP R+KE+E LAKITRDSAKITVEQVHGLMSQVIKDILFNS Q+ KS +
Sbjct: 290 GG-IAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKS-ADD 347
Query: 265 TSDPEPMIES 236
+SDPEPMI S
Sbjct: 348 SSDPEPMITS 357
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,193,023
Number of Sequences: 1393205
Number of extensions: 10040785
Number of successful extensions: 23451
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 22715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23417
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
