Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003704A_C01 KMC003704A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T31428 fiber annexin - upland cotton gi|3493172|gb|AAC33305... 119 3e-26
pir||T10805 annexin - upland cotton (fragment) 119 3e-26
gb|AAB67993.2| annexin [Gossypium hirsutum] 118 4e-26
gb|AAB71830.1| annexin [Lavatera thuringiaca] 115 4e-25
pir||T09552 annexin - alfalfa (fragment) gi|512400|emb|CAA52903.... 108 5e-23
>pir||T31428 fiber annexin - upland cotton gi|3493172|gb|AAC33305.1| fiber
annexin [Gossypium hirsutum]
Length = 316
Score = 119 bits (297), Expect = 3e-26
Identities = 55/72 (76%), Positives = 65/72 (89%)
Frame = -1
Query: 541 PEKYFEKFIRLSINQRGTDEGAPTRVVAPRAEIDLKILANEYQRRSSIPLDRAIIKDTHG 362
PEKYFEK +RL+IN+RGTDEGA TRVV RAE+DLKI+A+EYQRR+S+PL RAI+KDTHG
Sbjct: 242 PEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKIIADEYQRRNSVPLTRAIVKDTHG 301
Query: 361 DYEKMLLALLGH 326
DYEK+LL L GH
Sbjct: 302 DYEKLLLVLAGH 313
>pir||T10805 annexin - upland cotton (fragment)
Length = 315
Score = 119 bits (297), Expect = 3e-26
Identities = 55/72 (76%), Positives = 65/72 (89%)
Frame = -1
Query: 541 PEKYFEKFIRLSINQRGTDEGAPTRVVAPRAEIDLKILANEYQRRSSIPLDRAIIKDTHG 362
PEKYFEK +RL+IN+RGTDEGA TRVV RAE+DLKI+A+EYQRR+S+PL RAI+KDTHG
Sbjct: 241 PEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKIIADEYQRRNSVPLTRAIVKDTHG 300
Query: 361 DYEKMLLALLGH 326
DYEK+LL L GH
Sbjct: 301 DYEKLLLVLAGH 312
>gb|AAB67993.2| annexin [Gossypium hirsutum]
Length = 315
Score = 118 bits (296), Expect = 4e-26
Identities = 54/72 (75%), Positives = 65/72 (90%)
Frame = -1
Query: 541 PEKYFEKFIRLSINQRGTDEGAPTRVVAPRAEIDLKILANEYQRRSSIPLDRAIIKDTHG 362
PEKYFEK +RL+IN+RGTDEGA TRVV RAE+DLK++A+EYQRR+S+PL RAI+KDTHG
Sbjct: 241 PEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHG 300
Query: 361 DYEKMLLALLGH 326
DYEK+LL L GH
Sbjct: 301 DYEKLLLVLAGH 312
>gb|AAB71830.1| annexin [Lavatera thuringiaca]
Length = 316
Score = 115 bits (287), Expect = 4e-25
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = -1
Query: 541 PEKYFEKFIRLSINQRGTDEGAPTRVVAPRAEIDLKILANEYQRRSSIPLDRAIIKDTHG 362
PEKYFEK +RL+IN+RGTDEGA TRVV+ RAE+DLKI+A+EYQRR+S+PL RAI+KDT+G
Sbjct: 242 PEKYFEKVLRLAINKRGTDEGALTRVVSTRAEVDLKIIADEYQRRNSVPLTRAIVKDTNG 301
Query: 361 DYEKMLLALLGHEDA 317
DYEK+LL L G +A
Sbjct: 302 DYEKLLLVLAGEVEA 316
>pir||T09552 annexin - alfalfa (fragment) gi|512400|emb|CAA52903.1| annexin
[Medicago sativa]
Length = 308
Score = 108 bits (269), Expect = 5e-23
Identities = 50/74 (67%), Positives = 64/74 (85%)
Frame = -1
Query: 541 PEKYFEKFIRLSINQRGTDEGAPTRVVAPRAEIDLKILANEYQRRSSIPLDRAIIKDTHG 362
PEKYFE+ +RL+IN+ GTDE A TRVV RAE+DL+ +A EYQRR+S+PLDRAI KDT G
Sbjct: 235 PEKYFEELLRLAINKMGTDENALTRVVTTRAEVDLQRIAEEYQRRNSVPLDRAIDKDTSG 294
Query: 361 DYEKMLLALLGHED 320
DY+K+LLAL+GH++
Sbjct: 295 DYQKILLALMGHDE 308
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,125,515
Number of Sequences: 1393205
Number of extensions: 10294820
Number of successful extensions: 28170
Number of sequences better than 10.0: 261
Number of HSP's better than 10.0 without gapping: 25456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28115
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
