Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003699A_C01 KMC003699A_c01
(543 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC07439.1| P0039H02.32 [Oryza sativa (japonica cultivar-gro... 107 9e-23
dbj|BAC07387.2| OJ1641_C04.20 [Oryza sativa (japonica cultivar-g... 107 9e-23
gb|AAO38000.1| putative receptor-like protein kinase [Oryza sati... 97 1e-19
gb|AAF00640.1|AC009540_17 hypothetical protein [Arabidopsis thal... 96 3e-19
ref|NP_566213.1| leucine-rich repeat transmembrane protein kinas... 96 3e-19
>dbj|BAC07439.1| P0039H02.32 [Oryza sativa (japonica cultivar-group)]
Length = 797
Score = 107 bits (267), Expect = 9e-23
Identities = 55/77 (71%), Positives = 61/77 (78%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 RRSVVDPEVRKLSLDPSLRTMMEICVRCLAKEPANRPSVEDVLWNLQFAAQVQDAWRGDS 354
RRS VDP V K D S++T+MEIC+RCLAKE RPSVEDVLWNLQFAAQVQD WRGDS
Sbjct: 717 RRSFVDPAVSKGCSDESVKTVMEICLRCLAKEAVQRPSVEDVLWNLQFAAQVQDDWRGDS 776
Query: 353 QSSEGSPSSPLE-PRKL 306
+SSE SP SP + PR L
Sbjct: 777 RSSEESPLSPSQIPRDL 793
>dbj|BAC07387.2| OJ1641_C04.20 [Oryza sativa (japonica cultivar-group)]
Length = 794
Score = 107 bits (267), Expect = 9e-23
Identities = 55/77 (71%), Positives = 61/77 (78%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 RRSVVDPEVRKLSLDPSLRTMMEICVRCLAKEPANRPSVEDVLWNLQFAAQVQDAWRGDS 354
RRS VDP V K D S++T+MEIC+RCLAKE RPSVEDVLWNLQFAAQVQD WRGDS
Sbjct: 714 RRSFVDPAVSKGCSDESVKTVMEICLRCLAKEAVQRPSVEDVLWNLQFAAQVQDDWRGDS 773
Query: 353 QSSEGSPSSPLE-PRKL 306
+SSE SP SP + PR L
Sbjct: 774 RSSEESPLSPSQIPRDL 790
>gb|AAO38000.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 833
Score = 97.4 bits (241), Expect = 1e-19
Identities = 46/66 (69%), Positives = 53/66 (79%)
Frame = -2
Query: 533 RRSVVDPEVRKLSLDPSLRTMMEICVRCLAKEPANRPSVEDVLWNLQFAAQVQDAWRGDS 354
RRS D EV K D SLRT+M+IC+RCLAKE RPS+EDVLWNLQFAAQVQD W GD+
Sbjct: 709 RRSFADQEVSKGCSDESLRTIMQICLRCLAKEAVQRPSIEDVLWNLQFAAQVQDDWEGDN 768
Query: 353 QSSEGS 336
+SS+GS
Sbjct: 769 RSSDGS 774
>gb|AAF00640.1|AC009540_17 hypothetical protein [Arabidopsis thaliana]
Length = 803
Score = 95.9 bits (237), Expect = 3e-19
Identities = 47/73 (64%), Positives = 55/73 (74%), Gaps = 2/73 (2%)
Frame = -2
Query: 542 DEARRSVVDPEVRKLSLDPSLRTMMEICVRCLAKEPANRPSVEDVLWNLQFAAQVQDAWR 363
D ARRS+VDP V + D SL+TMMEICVRCL K+P RPS+EDVLWNLQFA+QVQ+ W
Sbjct: 700 DGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWL 759
Query: 362 GDSQSSE--GSPS 330
+S S GSPS
Sbjct: 760 QNSNPSSNLGSPS 772
>ref|NP_566213.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g03770.1, supported by cDNA: 116488. [Arabidopsis
thaliana] gi|21536973|gb|AAM61314.1| unknown
[Arabidopsis thaliana]
Length = 802
Score = 95.9 bits (237), Expect = 3e-19
Identities = 47/73 (64%), Positives = 55/73 (74%), Gaps = 2/73 (2%)
Frame = -2
Query: 542 DEARRSVVDPEVRKLSLDPSLRTMMEICVRCLAKEPANRPSVEDVLWNLQFAAQVQDAWR 363
D ARRS+VDP V + D SL+TMMEICVRCL K+P RPS+EDVLWNLQFA+QVQ+ W
Sbjct: 700 DGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWL 759
Query: 362 GDSQSSE--GSPS 330
+S S GSPS
Sbjct: 760 QNSNPSSNLGSPS 772
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 410,558,594
Number of Sequences: 1393205
Number of extensions: 7907065
Number of successful extensions: 20451
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 19777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20446
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
