Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003673A_C01 KMC003673A_c01
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA85412.1| ESTs AU065232(E60855),C23624(S1554), AU078241(E6... 140 9e-33
ref|NP_181262.1| putative adenylate kinase; protein id: At2g3725... 134 1e-30
ref|NP_030474.1| similar to putative adenylate kinase; protein i... 120 1e-26
gb|AAN76661.1| adenylate kinase [Solanum tuberosum] 117 1e-25
ref|ZP_00116246.1| hypothetical protein [Synechococcus sp. WH 8102] 46 3e-04
>dbj|BAA85412.1| ESTs AU065232(E60855),C23624(S1554), AU078241(E60855) correspond to
a region of the predicted gene.~similar to putative
adenylate kinase. (AC005896) [Oryza sativa (japonica
cultivar-group)]
Length = 323
Score = 140 bits (354), Expect = 9e-33
Identities = 64/93 (68%), Positives = 79/93 (84%)
Frame = -1
Query: 575 IKAENGNPEIVMAPLLPPTDCMSKLTTRSDDTEAVVKERLRIYREMSRPVEEFYRSRGRL 396
+K ENG P I MAPLLPP +CMSKL TR+DDTE VV+ RL+IY +MS+PVE FYR +G+L
Sbjct: 231 VKGENGLPPIYMAPLLPPNNCMSKLITRADDTEEVVRNRLQIYNDMSQPVEGFYRQQGKL 290
Query: 395 LEFNLPGGIPESWPKLLHALNLDNYEDQRIATA 297
LEF+LPGGIPESWPKLLH LNL++ E+ ++ATA
Sbjct: 291 LEFDLPGGIPESWPKLLHVLNLEDQEEMKLATA 323
>ref|NP_181262.1| putative adenylate kinase; protein id: At2g37250.1, supported by
cDNA: 15831., supported by cDNA: gi_15010785, supported
by cDNA: gi_15450418, supported by cDNA: gi_15810108
[Arabidopsis thaliana] gi|25408540|pir||D84790 probable
adenylate kinase [imported] - Arabidopsis thaliana
gi|4056480|gb|AAC98046.1| putative adenylate kinase
[Arabidopsis thaliana] gi|15010786|gb|AAK74052.1|
At2g37250/F3G5.4 [Arabidopsis thaliana]
gi|15450419|gb|AAK96503.1| At2g37250/F3G5.4 [Arabidopsis
thaliana] gi|15810109|gb|AAL06980.1| At2g37250/F3G5.4
[Arabidopsis thaliana] gi|21553713|gb|AAM62806.1|
putative adenylate kinase [Arabidopsis thaliana]
Length = 284
Score = 134 bits (336), Expect = 1e-30
Identities = 61/93 (65%), Positives = 76/93 (81%)
Frame = -1
Query: 575 IKAENGNPEIVMAPLLPPTDCMSKLTTRSDDTEAVVKERLRIYREMSRPVEEFYRSRGRL 396
+K ENG P I M PLLPP CMSKL TR+DDTE VVK RLRIY E S+P+EE+YR++G+L
Sbjct: 192 LKGENGRPGISMDPLLPPHQCMSKLVTRADDTEEVVKARLRIYNETSQPLEEYYRTKGKL 251
Query: 395 LEFNLPGGIPESWPKLLHALNLDNYEDQRIATA 297
+EF+LPGGIPESWP+LL AL LD+YE+++ A
Sbjct: 252 MEFDLPGGIPESWPRLLEALRLDDYEEKQSVAA 284
>ref|NP_030474.1| similar to putative adenylate kinase; protein id: At2g39270.1
[Arabidopsis thaliana] gi|7484792|pir||T02575 adenylate
kinase homolog T16B24.9 - Arabidopsis thaliana
gi|27754513|gb|AAO22704.1| putative adenylate kinase
[Arabidopsis thaliana] gi|28393969|gb|AAO42392.1|
putative adenylate kinase [Arabidopsis thaliana]
Length = 295
Score = 120 bits (301), Expect = 1e-26
Identities = 56/91 (61%), Positives = 72/91 (78%)
Frame = -1
Query: 575 IKAENGNPEIVMAPLLPPTDCMSKLTTRSDDTEAVVKERLRIYREMSRPVEEFYRSRGRL 396
IK ++ P + M PLLPP +C SKL +R+DDTE VVKERLRIY +M++PVEEFY+ RG+L
Sbjct: 205 IKGDDDTPRMYMPPLLPPPNCESKLISRADDTEEVVKERLRIYNKMTQPVEEFYKKRGKL 264
Query: 395 LEFNLPGGIPESWPKLLHALNLDNYEDQRIA 303
LEF LPGGIPESW +LL AL+L++ + IA
Sbjct: 265 LEFELPGGIPESWARLLRALHLEDDKQSAIA 295
>gb|AAN76661.1| adenylate kinase [Solanum tuberosum]
Length = 288
Score = 117 bits (292), Expect = 1e-25
Identities = 57/86 (66%), Positives = 66/86 (76%)
Frame = -1
Query: 575 IKAENGNPEIVMAPLLPPTDCMSKLTTRSDDTEAVVKERLRIYREMSRPVEEFYRSRGRL 396
+ ENG P I MA L PP KL TR+DDTEA+VKERL IY + S+PVE+FYRS+G+L
Sbjct: 196 VAGENGAPRISMARLNPPFTVCFKLITRADDTEAIVKERLSIYWDKSQPVEDFYRSQGKL 255
Query: 395 LEFNLPGGIPESWPKLLHALNLDNYE 318
LEF+LPGGIPESWPKLL LNLD E
Sbjct: 256 LEFDLPGGIPESWPKLLEVLNLDEQE 281
>ref|ZP_00116246.1| hypothetical protein [Synechococcus sp. WH 8102]
Length = 183
Score = 46.2 bits (108), Expect = 3e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = -1
Query: 494 RSDDTEAVVKERLRIYREMSRPVEEFYRSRGRLLEFNLPGGIPESWPKLLHALN 333
R DD EAV++ RL +YRE + P+ FYR +G L+ G + E ++ L+
Sbjct: 130 RDDDNEAVIRNRLEVYREKTSPLISFYRDKGLLVSVEANGSVEEITQRITKVLS 183
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,844,523
Number of Sequences: 1393205
Number of extensions: 10223270
Number of successful extensions: 25791
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 25204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25786
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
