Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003610A_C01 KMC003610A_c01
(576 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 164 7e-40
pir||S37642 protein kinase MSK-3 (EC 2.7.1.-) [similarity] - alf... 164 7e-40
sp|P51138|MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 gi... 157 7e-38
emb|CAA10288.1| protein kinase [Cicer arietinum] 156 2e-37
sp|Q40518|MSK1_TOBAC Shaggy-related protein kinase NtK-1 gi|1076... 149 2e-35
>sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3
Length = 411
Score = 164 bits (415), Expect = 7e-40
Identities = 77/86 (89%), Positives = 81/86 (93%)
Frame = -2
Query: 575 HKIFHKRMPPEAVDLVSRLLPYSPNLRSTALEALVHPFYDELREANTRLPNARFLPPLFN 396
HKIFHKRMPPEAVDLVSRLL YSPNLRSTALEALVHPFYD++R+ NTRLPN RFLPPLFN
Sbjct: 320 HKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDDVRDPNTRLPNGRFLPPLFN 379
Query: 395 FKANELKGVAAEMLVKLIPPHARKQC 318
FK NELKGV AEMLVKL+PPHARKQC
Sbjct: 380 FKVNELKGVPAEMLVKLVPPHARKQC 405
>pir||S37642 protein kinase MSK-3 (EC 2.7.1.-) [similarity] - alfalfa
gi|313148|emb|CAA48472.1| protein kinase [Medicago
sativa]
Length = 412
Score = 164 bits (415), Expect = 7e-40
Identities = 77/86 (89%), Positives = 81/86 (93%)
Frame = -2
Query: 575 HKIFHKRMPPEAVDLVSRLLPYSPNLRSTALEALVHPFYDELREANTRLPNARFLPPLFN 396
HKIFHKRMPPEAVDLVSRLL YSPNLRSTALEALVHPFYD++R+ NTRLPN RFLPPLFN
Sbjct: 321 HKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDDVRDPNTRLPNGRFLPPLFN 380
Query: 395 FKANELKGVAAEMLVKLIPPHARKQC 318
FK NELKGV AEMLVKL+PPHARKQC
Sbjct: 381 FKVNELKGVPAEMLVKLVPPHARKQC 406
>sp|P51138|MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 gi|481019|pir||S37643
protein kinase MSK-2 (EC 2.7.1.-) [similarity] - alfalfa
gi|313146|emb|CAA48473.1| protein kinase [Medicago
sativa]
Length = 411
Score = 157 bits (398), Expect = 7e-38
Identities = 76/86 (88%), Positives = 79/86 (91%)
Frame = -2
Query: 575 HKIFHKRMPPEAVDLVSRLLPYSPNLRSTALEALVHPFYDELREANTRLPNARFLPPLFN 396
HKIF KRMPPEAVDLVSRLL YSPNLRSTALEALVHPF+DELR+ NTRLPN R LPPLFN
Sbjct: 320 HKIFRKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRHLPPLFN 379
Query: 395 FKANELKGVAAEMLVKLIPPHARKQC 318
FKANELKGV AEMLVKL+P HARKQC
Sbjct: 380 FKANELKGVPAEMLVKLVPSHARKQC 405
>emb|CAA10288.1| protein kinase [Cicer arietinum]
Length = 313
Score = 156 bits (395), Expect = 2e-37
Identities = 77/86 (89%), Positives = 79/86 (91%)
Frame = -2
Query: 575 HKIFHKRMPPEAVDLVSRLLPYSPNLRSTALEALVHPFYDELREANTRLPNARFLPPLFN 396
HKIF KRMPPEAVDLVSRLL YSPNLRSTALEALVHPF DELR+ NTRLPN R LPPLFN
Sbjct: 223 HKIFRKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFLDELRDPNTRLPNGRHLPPLFN 282
Query: 395 FKANELKGVAAEMLVKLIPPHARKQC 318
FKANELKGV+AEMLVKLIP HARKQC
Sbjct: 283 FKANELKGVSAEMLVKLIPLHARKQC 308
>sp|Q40518|MSK1_TOBAC Shaggy-related protein kinase NtK-1 gi|1076641|pir||S52095
tau-protein kinase (EC 2.7.1.135) homolog - common
tobacco gi|456356|emb|CAA54803.1| shaggy like protein
kinase [Nicotiana tabacum] gi|1094395|prf||2106142A
Ser/Thr protein kinase
Length = 409
Score = 149 bits (377), Expect = 2e-35
Identities = 73/91 (80%), Positives = 80/91 (87%)
Frame = -2
Query: 575 HKIFHKRMPPEAVDLVSRLLPYSPNLRSTALEALVHPFYDELREANTRLPNARFLPPLFN 396
HKIFHKRMPPEAVDLVSRLL YSPNLR TALEA+ H F+DELR+ NTRLPN R LPPLFN
Sbjct: 319 HKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDELRDPNTRLPNGRVLPPLFN 378
Query: 395 FKANELKGVAAEMLVKLIPPHARKQCCPCLG 303
FKA+ELKGV+AE L+KL+P HARKQ CP LG
Sbjct: 379 FKAHELKGVSAENLLKLVPEHARKQ-CPSLG 408
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,508,955
Number of Sequences: 1393205
Number of extensions: 10531073
Number of successful extensions: 27797
Number of sequences better than 10.0: 835
Number of HSP's better than 10.0 without gapping: 26739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27746
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
