Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003534A_C01 KMC003534A_c01
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189150.1| glycosyl transferase, putative; protein id: At3... 251 7e-66
ref|NP_566170.1| expressed protein; protein id: At3g02350.1, sup... 226 2e-58
ref|NP_191672.1| putative protein; protein id: At3g61130.1, supp... 181 7e-45
emb|CAB81547.1| 68 kDa protein [Cicer arietinum] 179 3e-44
gb|AAM18739.1|AC092548_17 hypothetical protein [Oryza sativa (ja... 174 9e-43
>ref|NP_189150.1| glycosyl transferase, putative; protein id: At3g25140.1, supported
by cDNA: gi_20466216 [Arabidopsis thaliana]
gi|26398609|sp|Q9LSG3|QUA1_ARATH Glycosyltransferase
QUASIMODO1 gi|9294170|dbj|BAB02072.1|
emb|CAB71043.1~gene_id:MJL12.8~similar to unknown
protein [Arabidopsis thaliana]
gi|20466217|gb|AAM20426.1| glycosyl transferase,
putative [Arabidopsis thaliana]
Length = 559
Score = 251 bits (640), Expect = 7e-66
Identities = 110/121 (90%), Positives = 117/121 (95%)
Frame = -2
Query: 626 CAWAYGMNFFDLDAWRREKCTEEYHYXQNLNENRTLWKLGTLPPGLITYYATTKPLDKSW 447
CAWAYGMNFFDLDAWRREKCTEEYHY QNLNENR LWKLGTLPPGLIT+Y+TTKPLDKSW
Sbjct: 439 CAWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSW 498
Query: 446 HVLGLGYNPSISMDEIKNAAVVHFNGNMKPWLDIAMTQFKPLWAKYVDYELEFVQACNFG 267
HVLGLGYNPSISMDEI+NAAVVHFNGNMKPWLDIAM QF+PLW K+VDY+LEFVQACNFG
Sbjct: 499 HVLGLGYNPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFG 558
Query: 266 I 264
+
Sbjct: 559 L 559
>ref|NP_566170.1| expressed protein; protein id: At3g02350.1, supported by cDNA:
110819., supported by cDNA: gi_19310440 [Arabidopsis
thaliana] gi|26394254|sp|Q9FWA4|GLTR_ARATH Probable
glycosyltransferase At3g02350
gi|10092184|gb|AAG12603.1|AC068900_9 unknown protein;
9779-11709 [Arabidopsis thaliana]
gi|19310441|gb|AAL84957.1| AT3g02350/F11A12_103
[Arabidopsis thaliana] gi|21536764|gb|AAM61096.1|
glycosyl transferase, putative [Arabidopsis thaliana]
gi|28416491|gb|AAO42776.1| At3g02350/F11A12_103
[Arabidopsis thaliana]
Length = 561
Score = 226 bits (576), Expect = 2e-58
Identities = 96/121 (79%), Positives = 110/121 (90%)
Frame = -2
Query: 626 CAWAYGMNFFDLDAWRREKCTEEYHYXQNLNENRTLWKLGTLPPGLITYYATTKPLDKSW 447
CAWA+GMN FDL+AWRREKCT++YHY QNLNE+RTLWKLGTLPPGLIT+Y+ TK LDKSW
Sbjct: 441 CAWAFGMNIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSW 500
Query: 446 HVLGLGYNPSISMDEIKNAAVVHFNGNMKPWLDIAMTQFKPLWAKYVDYELEFVQACNFG 267
HVLGLGYNP +SMDEI+NA V+H+NGNMKPWLDIAM Q+K LW KYVD E+EFVQ CNFG
Sbjct: 501 HVLGLGYNPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFG 560
Query: 266 I 264
+
Sbjct: 561 L 561
>ref|NP_191672.1| putative protein; protein id: At3g61130.1, supported by cDNA:
gi_14517361 [Arabidopsis thaliana]
gi|11282349|pir||T47905 hypothetical protein T20K12.30 -
Arabidopsis thaliana gi|6850880|emb|CAB71043.1| putative
protein [Arabidopsis thaliana]
gi|7799777|emb|CAB91508.1| like glycosyl transferase 1
[Arabidopsis thaliana]
Length = 673
Score = 181 bits (459), Expect = 7e-45
Identities = 74/118 (62%), Positives = 95/118 (79%)
Frame = -2
Query: 626 CAWAYGMNFFDLDAWRREKCTEEYHYXQNLNENRTLWKLGTLPPGLITYYATTKPLDKSW 447
C WAYGMN FDL W++ T YH QN+NENRTLWKLGTLPPGLIT+Y T PL+K+W
Sbjct: 553 CGWAYGMNMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAW 612
Query: 446 HVLGLGYNPSISMDEIKNAAVVHFNGNMKPWLDIAMTQFKPLWAKYVDYELEFVQACN 273
HVLGLGYNPSI +I+NAAVVH+NGNMKPWL++AM++++P W KY+ ++ +++ CN
Sbjct: 613 HVLGLGYNPSIDKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIKFDHPYLRRCN 670
>emb|CAB81547.1| 68 kDa protein [Cicer arietinum]
Length = 591
Score = 179 bits (454), Expect = 3e-44
Identities = 75/117 (64%), Positives = 94/117 (80%)
Frame = -2
Query: 626 CAWAYGMNFFDLDAWRREKCTEEYHYXQNLNENRTLWKLGTLPPGLITYYATTKPLDKSW 447
C WAYGMN FDL W+++ T YH QNLNE+R LWKLGTLPPGL+T+Y T PL+KSW
Sbjct: 469 CGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSW 528
Query: 446 HVLGLGYNPSISMDEIKNAAVVHFNGNMKPWLDIAMTQFKPLWAKYVDYELEFVQAC 276
HVLGLGY+PS+ EI+NAAVVH+NGNMKPWL+IAMT+++P W+KYV Y +++ C
Sbjct: 529 HVLGLGYSPSVDRSEIENAAVVHYNGNMKPWLEIAMTKYRPYWSKYVKYNHPYLRNC 585
>gb|AAM18739.1|AC092548_17 hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 611
Score = 174 bits (441), Expect = 9e-43
Identities = 71/117 (60%), Positives = 95/117 (80%)
Frame = -2
Query: 626 CAWAYGMNFFDLDAWRREKCTEEYHYXQNLNENRTLWKLGTLPPGLITYYATTKPLDKSW 447
C WA+GMN FDL W+++ T YHY Q+LNE+R LWKLGTLPPGLIT+Y T PL+++W
Sbjct: 490 CGWAFGMNMFDLKEWKKQNITGIYHYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRNW 549
Query: 446 HVLGLGYNPSISMDEIKNAAVVHFNGNMKPWLDIAMTQFKPLWAKYVDYELEFVQAC 276
HVLGLGY+P++ + EI+NAAVVH+NGN KPWLD+A++++KP W+KYVD + +Q C
Sbjct: 550 HVLGLGYDPAVDLAEIENAAVVHYNGNYKPWLDLAVSKYKPYWSKYVDLDNSHIQHC 606
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 543,043,771
Number of Sequences: 1393205
Number of extensions: 11411858
Number of successful extensions: 25666
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 24998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25623
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
